@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0989: (2018-01-02 )
MRKIVINGGLPLQGEITISGAKNSVVALIPAIILADDVVTLDCVPDISDVASLVEIMELMGATVKRYDDVLEIDPRGVQNIPMPYGKINSLRASYYFYGSLLGRFGEATVGLPGGCDLGPRPIDLHLKAFEAMGATASYEGDNMKLSAKDTGLHGASIYMDTVSVGATINTMIAAVKANGRTIIENAAREPEIIDVATLLNNMGAHIRGAGTNIIIIDGVERLHGTRHQVIPDRIEAGTYISLAAAVGKGIRINNVLYEHLEGFVAKLEEMGVRMTVSEDSIFVEEQSNLKAINIKTAPYPGFATDLQQPLTPLLLRANGRGTIVDTIYEKRVNHVFELAKMDADISTTNGHILYTGGRDLRGASVKATDLRAGAALVIAGLMAEGKTEITNIEFILRGYSDIIEKLRNLGADIRLVED

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

UD1_A_6(2RL2)
MURA_HAEIN
[Raw transfer]



UD1_D_4(1UAE)
MURA_ECOLI
[Raw transfer]



UD1_A_3(2RL1)
MURA_HAEIN
[Raw transfer]



EPU_A_3(2YVW)
MURA_AQUAE
[Raw transfer]



PEG_A_3(3ZH4)
MURA1_STRPI
[Raw transfer]



FCN_G_7(1UAE)
MURA_ECOLI
[Raw transfer]



PEG_A_3(3ZH4)
MURA1_STRPI
[Raw transfer]



0V5_B_17(5U4H)
?
[Raw transfer]



0V5_A_11(5U4H)
?
[Raw transfer]



0V5_B_17(5U4H)
?
[Raw transfer]



GG6_A_5(2RL2)
MURA_HAEIN
[Raw transfer]
2 PsiBlast_PDB 97.6499%-121 - C8 -3ZH4 2.1 MURA1_STRPI
46 HHSearch 86.1897% -35 - C8 -3ZH4 2.1 MURA1_STRPI
10 PsiBlast_PDB 75.8044% -84 - C8 -1NAW - MURA_ENTCC -
9 PsiBlast_PDB 75.3344% -81 - C8 -3SPB - MURA_ENTCC -
16 PsiBlast_PDB 74.6037% -94 - C8 -2YVW 6.0 MURA_AQUAE
24 PsiBlast_CBE 73.2546% -75 - C8 -4R7U - MURA_VIBCH -
5 PsiBlast_PDB 73.1045% -64 - C8 -1UAE 7.7 MURA_ECOLI
12 PsiBlast_PDB 73.0142% -85 - C8 -5U4H 3.2 ?
26 PsiBlast_CBE 72.8746% -74 - C8 -4R7U - MURA_VIBCH -
4 PsiBlast_PDB 72.8446% -73 - C8 -4R7U - MURA_VIBCH -
32 PsiBlast_CBE 72.6442% -85 - C8 -5U4H 3.2 ?
25 PsiBlast_CBE 72.3646% -73 - C8 -4R7U - MURA_VIBCH -
65 HHSearch 72.1242% -83 * C8 *5U4H 3.2 ?
8 PsiBlast_PDB 71.6345% -62 - C8 -1A2N - MURA_ECOLI -
1 PsiBlast_PDB 71.4599% - - C8 -3ZH3 - MURA1_STRP2 -
15 PsiBlast_PDB 71.2839% -59 - C8 -5UJS - MURA_CAMJE -
47 HHSearch 69.7638% -55 - C8 -5UJS - MURA_CAMJE -
48 HHSearch 69.6138% -57 - C8 -5UJS - MURA_CAMJE -
11 PsiBlast_PDB 68.7043% -15 - C8 -3R38 - MURA1_LISMO -
58 HHSearch 68.6896% - - C8 -3ZH3 - MURA1_STRP2 -
14 PsiBlast_PDB 68.5141% -24 - C8 -2RL2 6.3 MURA_HAEIN
13 PsiBlast_PDB 68.2741% -25 - C8 -2RL1 6.9 MURA_HAEIN