@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0992: (2018-01-02 )
MITLKSAREIEAMDKAGDFLASIHIGLRDLIKPGVDMWEVEEYVRRRCKEENFLPLQIGVDGAMMDYPYATCCSLNDEVAHAFPRHYILKDGDLLKVDMVLGGPIAKSDLNVSKLNFNNVEQMKKYTQSYSGGLADSCWAYAVGTPSEEVKNLMDVTKEAMYKGIEQAVVGNRIGDIGAAIQEYAESRGYGVVRDLVGHGVGPTMHEEPMVPNYGIAGRGLRLREGMVLTIEPMINTGDWEIDTDMKTGWAHKTIDGGLSCQYEHQFVITKDGPVILTSQGEEGTY

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NLP_A_9(2GU4)
MAP1_ECOLI
[Raw transfer]




IKY_B_7(4A6V)
?
[Raw transfer]




A05_A_5(2Q95)
MAP1_ECOLI
[Raw transfer]




MPH_A_5(1C23)
MAP1_ECOLI
[Raw transfer]




NLP_A_5(1C27)
MAP1_ECOLI
[Raw transfer]




FC2_A_5(2EVM)
MAP1_ECOLI
[Raw transfer]




YE6_A_4(2P99)
MAP1_ECOLI
[Raw transfer]




B21_A_5(2Q93)
MAP1_ECOLI
[Raw transfer]




U13_A_5(2GG3)
MAP1_ECOLI
[Raw transfer]




CIT_B_5(3TB5)
?
[Raw transfer]




CIT_A_4(3TB5)
?
[Raw transfer]




CIT_A_4(3TB5)
?
[Raw transfer]




4L9_A_4(4Z7M)
MAP1_ECOLI
[Raw transfer]




TMG_A_7(1YVM)
MAP1_ECOLI
[Raw transfer]




84 HHSearch 95.99100% -86 - C4 -4KM3 - ? -
83 HHSearch 95.93100% -92 - C4 -4KM3 - ? -
1 PsiBlast_PDB 95.7899% -86 - C4 -4KM3 - ? -
90 HHSearch 83.8461%-105 - C4 -3TB5 3.5 ?
2 PsiBlast_PDB 83.7055%-102 - C4 -3TB5 3.5 ?
21 PsiBlast_CBE 82.4155%-102 - C4 -3TB5 3.2 ?
89 HHSearch 73.2632%-104 - C4 -4IU6 - MAP11_HUMAN -
95 HHSearch 72.1331%-102 - C4 -4HXX - MAP11_HUMAN -
91 HHSearch 72.0637% -94 - C4 -3MX6 - MAP1_RICPR -
92 HHSearch 72.0537% -97 - C4 -3MX6 - MAP1_RICPR -
85 HHSearch 72.0332%-105 - C4 -2B3H - MAP11_HUMAN -
93 HHSearch 71.6439%-100 - C4 -4FO7 - ? -
94 HHSearch 70.7739% -88 - C4 -4FO8 - ? -
5 PsiBlast_PDB 69.5834% -94 - C4 -3MX6 - MAP1_RICPR -
4 PsiBlast_PDB 69.1534% -92 - C4 -3MR1 - MAP1_RICPR -
87 HHSearch 68.3329% -93 - C4 -4FUK - ? -
88 HHSearch 66.8829% -88 - C4 -4FUK - ? -
86 HHSearch 63.9731% -34 - C4 -3S6B - ? -
99 HHSearch 62.3437% -15 * C4 *2Q95 - MAP1_ECOLI -
98 HHSearch 61.7737% -20 - C4 -2GGC - MAP1_ECOLI -