@TOME V2.3
(Mar 2018)

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Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1021: (2018-01-03 )
MIILQANKIERSFAGEVLFDNINLQVDERDRIALVGKNGAGKSTLLKILVGEEEPTSGEINKKKDISLSYLAQDSRFESENTIYDEMLHVFNDLRRTERQLRQMELEMGEKSGEDLDKLMSDYDRLSENFRQAGGFTYEADIRAILNGFKFDESMWQMKIAELSGGQNTRLALAKMLLEKPNLLVLDEPTNHLDIETIAWLENYLVNYSGALIIVSHDRYFLDKVATITLDLTKHSLDRYVGNYSRFVELKEQKLVTEAKNYEKQQKEIAALEDFVNRNLVRASTTKRAQSRRKQLEKMERLDKPEAGKKSANMTFQSEKTSGNVVLTVENAAVGYDGEVLSQPINLDLRKMNAVAIVGPNGIGKSTFIKSIVDQIPFIKGEKRFGANVEVGYYDQTQSKLTPSNTVLDELWNDFKLTPEVEIRNRLGAFLFSGDDVKKSVGMLSGGEKARLLLAKLSMENNNFLILDEPTNHLDIDSKEVLENALIDFDGTLLFVSHDRYFINRVATHVLELSENGSTLYLGDYDYYVEKKATAEMSQTEEASTSNQAKEASPVNDYQAQKESQKEVRKLMRQIESLEAEIEELESQSQAISEQMLETNDADKLMELQAELDKISHRQEEAMLEWEELSEQV

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_6(3BK7)
?
[Raw transfer]



ADP_A_4(1YQT)
?
[Raw transfer]
27 HHSearch 80.0627% -60 - C1 -2IW3 - EF3A_YEAST -
36 HHSearch 78.9127% -57 - C1 -2IX8 - -
2 PsiBlast_PDB 78.2035% -5 - C1 -4FIN - ETTA_ECOLI -
1 PsiBlast_PDB 77.2635% 16 - C1 -3J5S - ETTA_ECOLI -
21 HHSearch 70.0034% 51 - C1 -3J5S - ETTA_ECOLI -
3 PsiBlast_PDB 66.5727% -92 - C1 -2IWH - EF3A_YEAST -
4 PsiBlast_PDB 66.1027% -91 - C1 -2IX3 - EF3A_YEAST -
6 PsiBlast_PDB 65.7926% -92 - C1 -2IW3 - EF3A_YEAST -
5 PsiBlast_PDB 61.6326% -83 - C1 -2IX8 - -
9 PsiBlast_PDB 53.9724% 28 - C1 -3BK7 5.3 ?
12 PsiBlast_PDB 52.7924% 30 - C1 -1YQT 5.6 ?
8 PsiBlast_PDB 51.4724% 32 - C1 -5LW7 - ? -
7 PsiBlast_PDB 50.9224% 32 - C1 -3J15 - ? -
51 Fugue 47.0817% 60 - C1 -3J16 - RLI1_YEAST -
48 HHSearch 44.7527% -31 - C1 -3FVQ - FBPC_NEIG1 -
42 HHSearch 44.6721% 28 - C1 -1YQT - ? -
38 HHSearch 44.3717% 28 - C1 -4CRM - RLI1_YEAST -
10 PsiBlast_PDB 42.8523% 35 - C1 -3OZX - ? -
47 HHSearch 41.9124% -4 - C1 -2D62 - ? -
44 HHSearch 41.4623% -11 * C1 *3RLF - MALK_ECOLI -