@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1024: (2018-01-03 )
MNKRMNELVALLNRYATEYYTSDNPSVSDSEYDRLYRELVELETAYPEQVLADSPTHRVGGKVLDGFEKYSHQYPLYSLQDAFSREELDAFDARVRKEVAHPTYICELKIDGLSISLTYEKGILVAGVTRGDGSIGENITENLKRVKDIPLTLPEELDITVRGECYMPRASFDQVNQARQENGEPEFANPRNAAAGTLRQLDTAVVAKRNLATFLYQEASPSTRDSQEKGLKYLEQLGFVVNPKRILAENIDEIWNFIQEVGQERENLPYDIDGVVIKVNDLASQEELGFTVKAPKWAVAYKFPAEEKEAQLLSVDWTVGRTGVVTPTANLTPVQLAGTTVSRATLHNVDYIAEKDIRKDDTVIVYKAGDIIPAVLRVVESKRVSEEKLDIPTNCPSCNSDLLHFEDEVALRCINPRCPAQIMEGLIHFASRDAMNITGLGPSIVEKLFAANLVKDVADIYRLQEEDFLLLEGVKEKSAAKLYQAIQASKENSAEKLLFGLGIRHVGSKASQLLLQYFHSIENLYQADSEEVASIESLGGVIAKSLQTYFAAEGSEILLRELKETGVNLDYKGQTVVADAALSGLTVVLTGKLERLKRSEAKSKLESLGAKVTGSVSKKTDLVVVGADAGSKLQKAQELGIQVRDEAWLESL

Atome Classification :

(35 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

3BA_A_7(3BAA)
DNLJ_ENTFA
[Raw transfer]




3BD_A_7(3BAB)
DNLJ_ENTFA
[Raw transfer]




0OW_A_5(4EFB)
DNLJ_ENTFA
[Raw transfer]




0XT_B_6(4GLW)
DNLJ_STRZP
[Raw transfer]




0XT_B_6(4GLW)
DNLJ_STRZP
[Raw transfer]




NAD_A_2(5TT5)
DNLJ_ECOLI
[Raw transfer]




NAD_A_2(5TT5)
DNLJ_ECOLI
[Raw transfer]




0XT_A_4(4GLW)
DNLJ_STRZP
[Raw transfer]




3B8_A_6(3BA8)
DNLJ_ENTFA
[Raw transfer]




3B9_A_7(3BA9)
DNLJ_ENTFA
[Raw transfer]




AMP_D_10(2OWO)
DNLJ_ECOLI
[Raw transfer]




0OV_A_5(4EFE)
DNLJ_ENTFA
[Raw transfer]




0OX_A_5(4EEQ)
DNLJ_ENTFA
[Raw transfer]




GOL_E_5(1TA8)
DNLJ_ENTFA
[Raw transfer]




IVH_A_2(3PN1)
DNLJ_HAEIN
[Raw transfer]




AMP_A_3(3UQ8)
DNLJ_HAEIN
[Raw transfer]




IVH_A_2(3PN1)
DNLJ_HAEIN
[Raw transfer]




AMP_A_3(3UQ8)
DNLJ_HAEIN
[Raw transfer]




AMP_B_2(1ZAU)
DNLJ_MYCTU
[Raw transfer]




AMP_B_2(1ZAU)
DNLJ_MYCTU
[Raw transfer]




0XS_A_7(4GLX)
DNLJ_ECOLI
[Raw transfer]




AMP_A_5(1V9P)
DNLJ_THEFI
[Raw transfer]




0XS_A_7(4GLX)
DNLJ_ECOLI
[Raw transfer]




AMP_B_6(1V9P)
DNLJ_THEFI
[Raw transfer]




AMP_B_6(1V9P)
DNLJ_THEFI
[Raw transfer]




AMP_A_5(1DGS)
DNLJ_THEFI
[Raw transfer]




AMP_A_5(1DGS)
DNLJ_THEFI
[Raw transfer]




1X8_A_2(4LH7)
DNLJ_ENTFA
[Raw transfer]




AMP_B_6(1DGS)
DNLJ_THEFI
[Raw transfer]




1X7_A_2(4LH6)
DNLJ_ENTFA
[Raw transfer]




1X7_A_2(4LH6)
DNLJ_ENTFA
[Raw transfer]




L5Y_A_3(4CC6)
DNLJ_STAAU
[Raw transfer]




L5V_A_3(4CC5)
DNLJ_STAAU
[Raw transfer]




10L_A_2(5FPO)
DNLJ_STAAU
[Raw transfer]




NACID_C_2(2OWO)
DNLJ_ECOLI
[Raw transfer]

-

NACID_C_2(4GLX)
DNLJ_ECOLI
[Raw transfer]

-

3 PsiBlast_PDB 69.7642% 17 - C7 -5TT5 11.5 DNLJ_ECOLI
5 PsiBlast_PDB 69.5540% -5 - C7 -4GLX 7.4 DNLJ_ECOLI
56 HHSearch 68.8041% 2 - C7 -4GLX 7.1 DNLJ_ECOLI
2 PsiBlast_PDB 68.6742% 33 - C7 -2OWO 7.0 DNLJ_ECOLI
54 HHSearch 68.2543% 29 - C7 -5TT5 11.5 DNLJ_ECOLI
22 PsiBlast_CBE 67.2344% 37 - C7 -1DGS 5.5 DNLJ_THEFI
44 Fugue 66.6143% 40 - C7 -1DGS 5.4 DNLJ_THEFI
23 PsiBlast_CBE 65.9643% 31 - C7 -1V9P 4.8 DNLJ_THEFI
6 PsiBlast_PDB 65.8543% 30 - C7 -1V9P 4.4 DNLJ_THEFI
4 PsiBlast_PDB 65.8444% 38 - C7 -1DGS 5.4 DNLJ_THEFI
55 HHSearch 64.5144% 37 - C7 -1V9P 4.8 DNLJ_THEFI
21 PsiBlast_CBE 64.24100% -69 - C7 -4GLW 4.8 DNLJ_STRZP
1 PsiBlast_PDB 62.59100% -68 - C7 -4GLW 5.2 DNLJ_STRZP
7 PsiBlast_PDB 59.2958% 0 - C- -1TAE - DNLJ_ENTFA -
57 HHSearch 54.3398% 31 - C7 -4GLW 4.8 DNLJ_STRZP
15 PsiBlast_PDB 53.7058% 2 - C7 -1TA8 3.5 DNLJ_ENTFA
14 PsiBlast_PDB 53.5958% 1 - C7 -4EFE 6.0 DNLJ_ENTFA
9 PsiBlast_PDB 53.2658% 5 - C7 -3BA9 7.2 DNLJ_ENTFA
12 PsiBlast_PDB 53.2458% 7 - C7 -4EEQ 4.9 DNLJ_ENTFA
13 PsiBlast_PDB 52.9658% 7 - C7 -4EFB 6.7 DNLJ_ENTFA
8 PsiBlast_PDB 52.6958% 7 - C7 -3BA8 6.3 DNLJ_ENTFA
10 PsiBlast_PDB 52.5058% 5 - C7 -3BAA 7.2 DNLJ_ENTFA
11 PsiBlast_PDB 52.2658% 4 - C7 -3BAB 8.1 DNLJ_ENTFA
16 PsiBlast_PDB 52.0558% 6 - C7 -4LH6 4.8 DNLJ_ENTFA
17 PsiBlast_PDB 51.7858% 6 - C7 -4LH7 4.8 DNLJ_ENTFA
63 HHSearch 51.1159% 16 - C7 -4LH6 4.8 DNLJ_ENTFA
28 PsiBlast_CBE 49.9152% -12 - C7 -5FPO 3.0 DNLJ_STAAU
29 PsiBlast_CBE 49.7252% -10 - C7 -4CC6 7.4 DNLJ_STAAU
20 PsiBlast_PDB 49.4652% -10 - C7 -4CC5 4.0 DNLJ_STAAU
62 HHSearch 46.2545% 12 * C7 *3PN1 7.1 DNLJ_HAEIN
58 HHSearch 46.2045% 23 - C7 -3UQ8 6.8 DNLJ_HAEIN
31 PsiBlast_CBE 44.3044% 36 - C7 -3UQ8 6.8 DNLJ_HAEIN
39 PsiBlast_CBE 43.0344% 34 - C7 -3PN1 7.1 DNLJ_HAEIN
61 HHSearch 41.5638% 27 - C7 -1ZAU 4.3 DNLJ_MYCTU
41 PsiBlast_CBE 39.1040% 26 - C7 -1ZAU 4.1 DNLJ_MYCTU