@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1025: (2018-01-03 )
MYNYPMRIHYHRKNGEYDTCSFVKSQDQRIDLLTYKEDYFGALFSFEHPSSHVIESLNFVVHTGQTSKEYSIRFNHYPLLTEVWILEGDDRIYYSENPAIASPFYKNQNPFAFDKAINSASFDHHWGYQGELGCRVEDNQAHFSLWSPTATEVQVVVYESAANDAPVWKTFEMKRGNSYSYNHKDNTIGVWSLDVEEDLVGKTYQYQVQFPHHQTLTRDPYTIATSPDGKRSAILSHVEKQVENFEVKHGSEATWRLENPCKAVICEMHIRDLTKSPTSGVDEHLRGTFLGAAQAGTVNQYGQSTAFDYIKKLGYNYVQLQPIADRHKEYDEDGNVTYNWGYDPQNYNAPETSFSTNPDDPAQVIRDLKVMVQAYHDAGIGVIMDVVYNHTFSVVDAPFQTTVPDYYYRMNPDGTFQNGTGVGNETASEHEMFRKYMIDSLLYWVQEYNIDGFRFDLMGIHDVKTMQMIRQSLDEIDSNIILYGEGWDMGTGLAPYDKAKKDNAYQMPNIGFFNDNQRDAVKGGEVYGAIKSGFVSGAATEPILAKAILGSRELGSYTHPNQVLNYVEAHDNYNLHDLLATLHPDQSSEQIMRKVETATAMNLLMQGMAFMEIGQEFGRTKLVATGENGELTHDDRERAMNSYNAPDSVNQVNWNLINERQDSIEFIRQVIRLKTKTGAFSYSSYDEIYHHVFVHSAIEHSGCLIYEVHGKEHLLVVVNAKSEPYQFENAGNLAMLVTNSRSKEDNVLNDISLAVLSVL

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

MTT_A_3(3WDJ)
?
[Raw transfer]



MLR_A_2(3WDI)
?
[Raw transfer]



MTT_A_2(3WDJ)
?
[Raw transfer]



ACX_A_5(2Y5E)
?
[Raw transfer]



MLR_A_3(3WDI)
?
[Raw transfer]



SUGAR_A_3(2FHF)
PULA_KLEAE
[Raw transfer]
-
SUGAR_A_2(4J3T)
?
[Raw transfer]
-
GOL_A_3(2Y4S)
?
[Raw transfer]



NOJ_A_2(2YA2)
?
[Raw transfer]



GOL_A_3(2YA0)
?
[Raw transfer]



GOL_A_4(2Y4S)
?
[Raw transfer]



GLC_A_3(2YA2)
?
[Raw transfer]
47 Fugue 77.9230% -29 - C1 -2E8Y - PULA_BACSU -
29 HHSearch 75.7736% 10 * C1 *3WDH - ? -
35 HHSearch 75.1830% 35 - C1 -2YA2 3.0 ?
30 HHSearch 75.1734% -2 - C1 -2E8Y - PULA_BACSU -
32 HHSearch 74.6528% 9 - C1 -4AIO - ? -
33 HHSearch 73.5328% 8 - C1 -4J3V - ? -
34 HHSearch 73.0130% 34 - C1 -2YA0 2.2 ?
31 HHSearch 70.9629% 35 - C1 -3FAW - ? -
2 PsiBlast_PDB 70.2335% 10 - C1 -3WDI 4.7 ?
4 PsiBlast_PDB 70.0633% -26 - C1 -2E8Y - PULA_BACSU -
22 PsiBlast_CBE 69.9233% -25 - C1 -2E8Z - PULA_BACSU -
28 HHSearch 69.7227% 26 - C1 -2FHF 5.2 PULA_KLEAE
23 PsiBlast_CBE 69.3233% -25 - C1 -2E8Y - PULA_BACSU -
3 PsiBlast_PDB 69.2435% 8 - C1 -3WDH - ? -
21 PsiBlast_CBE 69.2333% -26 - C1 -2E9B - PULA_BACSU -
5 PsiBlast_PDB 69.1133% -26 - C1 -2E8Z - PULA_BACSU -
1 PsiBlast_PDB 68.6335% 9 - C1 -3WDJ 5.1 ?
6 PsiBlast_PDB 68.4633% -25 - C1 -2E9B - PULA_BACSU -
49 Fugue 67.2426% 33 - C1 -3FAW - ? -
39 HHSearch 66.8625% - - C1 -4J7R - ? -