@TOME V2.3
(Mar 2018)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1069: (2018-01-04 )
MTKTLPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLEDNYWYTAEPASDFYNRYPVDLKLAEEYGVNGIRISIAWSRIFPTGYGQVNAKGVEFYHNLFAECHKRHVEPFVTLHHFDTPEALHSNGDFLNRENIEHFVDYAAFCFEEFPEVNYWTTFNEIGPIGDGQYLVGKFPPGIQYDLAKVFQSHHNMMVSHARAVKLYKDKGYKGEIGVVHALPTKYPLDHENPADVRAAELEDIIHNKFILDATYLGRYSAETMEGVNHILSVNGGSLDLREEDFTALEAAKDLNDFLGINYYMSDWMEAFDGETEIIHNGKGKKGSSKYQIKGVGRRVAPDYVPRTDWDWIIYPQGLYDQIMRVKKDYPNYKKIYITENGLGYKDEFVDNTVYDDGRIDYVKQHLEILSDAIADGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDFETQERYPKKSAHWYKKVAETQIID

Atome Classification :

(50 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BGP_B_4(4PBG)
LACG_LACLL
[Raw transfer]



BG6_A_3(4ZEP)
?
[Raw transfer]



GIM_A_4(2CES)
BGLA_THEMA
[Raw transfer]



GIM_B_7(2CES)
BGLA_THEMA
[Raw transfer]



BGP_A_3(4ZEN)
?
[Raw transfer]



NOY_B_6(2J75)
BGLA_THEMA
[Raw transfer]



CTS_B_6(2CBU)
BGLA_THEMA
[Raw transfer]



NOJ_A_3(1OIM)
BGLA_THEMA
[Raw transfer]



GOX_B_9(2J78)
BGLA_THEMA
[Raw transfer]



NTZ_B_5(2J7B)
BGLA_THEMA
[Raw transfer]



BG6_B_7(4ZEP)
?
[Raw transfer]



IFL_B_4(1UZ1)
BGLA_THEMA
[Raw transfer]



BGP_B_14(4ZEN)
?
[Raw transfer]



NOJ_B_5(2J77)
BGLA_THEMA
[Raw transfer]



CTS_A_3(2CBU)
BGLA_THEMA
[Raw transfer]



CGB_B_5(2CBV)
BGLA_THEMA
[Raw transfer]



IFL_A_3(1UZ1)
BGLA_THEMA
[Raw transfer]



8P2_B_11(5N6T)
?
[Raw transfer]



NOJ_B_4(1OIM)
BGLA_THEMA
[Raw transfer]



NOY_A_4(2J75)
BGLA_THEMA
[Raw transfer]



OXZ_A_3(1W3J)
BGLA_THEMA
[Raw transfer]



BGC_A_3(4PTX)
?
[Raw transfer]



CGB_A_3(2CBV)
BGLA_THEMA
[Raw transfer]



AZF_B_7(2J7H)
BGLA_THEMA
[Raw transfer]



8P2_A_7(5N6T)
?
[Raw transfer]



OXZ_B_4(1W3J)
BGLA_THEMA
[Raw transfer]



SRT_A_24(3CMJ)
?
[Raw transfer]



IFM_A_3(1OIF)
BGLA_THEMA
[Raw transfer]



YLL_B_6(2JAL)
BGLA_THEMA
[Raw transfer]



IFM_B_4(1OIF)
BGLA_THEMA
[Raw transfer]



BGC_B_5(4PTX)
?
[Raw transfer]



G2F_A_3(1OIN)
BGLA_THEMA
[Raw transfer]



G2F_A_9(1E4I)
BGLA_PAEPO
[Raw transfer]



G2F_A_9(1E4I)
BGLA_PAEPO
[Raw transfer]



G2F_B_4(1OIN)
BGLA_THEMA
[Raw transfer]



G2F_A_9(1UYQ)
BGLA_PAEPO
[Raw transfer]
3 PsiBlast_PDB 99.6793% -74 - C3 -4PBG - LACG_LACLL -
1 PsiBlast_PDB 99.3694% -72 - C3 -3PBG - LACG_LACLL -
23 PsiBlast_CBE 99.0593% -72 - C3 -4PBG 5.1 LACG_LACLL
2 PsiBlast_PDB 98.9193% -73 - C3 -2PBG - LACG_LACLL -
142 HHSearch 62.1035% -15 * C3 *1E4I 2.1 BGLA_PAEPO
92 PsiBlast_CBE 61.9934% -5 - C3 -2J75 4.2 BGLA_THEMA
67 PsiBlast_CBE 61.8234% -3 - C3 -2WC4 - BGLA_THEMA -
76 PsiBlast_CBE 61.6934% -2 - C3 -2WBG - BGLA_THEMA -
75 PsiBlast_CBE 61.6534% -2 - C3 -2WBG - BGLA_THEMA -
79 PsiBlast_CBE 61.4634% -1 - C3 -2JAL 3.6 BGLA_THEMA
66 PsiBlast_CBE 61.4534% -3 - C3 -2WC4 - BGLA_THEMA -
68 PsiBlast_CBE 61.4434% -2 - C3 -2WC4 - BGLA_THEMA -
69 PsiBlast_CBE 61.3634% -2 - C3 -2WC3 - BGLA_THEMA -
94 PsiBlast_CBE 61.2934% -2 - C3 -2CET - BGLA_THEMA -
72 PsiBlast_CBE 61.2934% -3 - C3 -2WC3 - BGLA_THEMA -
97 PsiBlast_CBE 61.2334% -2 - C3 -2CBV 4.2 BGLA_THEMA
99 PsiBlast_CBE 61.2234% -3 - C3 -2CBU 4.6 BGLA_THEMA
78 PsiBlast_CBE 61.1134% -4 - C3 -2VRJ - BGLA_THEMA -
74 PsiBlast_CBE 61.1134% -2 - C3 -2WBG - BGLA_THEMA -
87 PsiBlast_CBE 61.0734% -3 - C3 -2J79 - BGLA_THEMA -
89 PsiBlast_CBE 61.0034% -3 - C3 -2J78 4.4 BGLA_THEMA
110 PsiBlast_CBE 60.9734% -2 - C3 -1OIF 3.7 BGLA_THEMA
80 PsiBlast_CBE 60.8834% -0 - C3 -2J7H 3.5 BGLA_THEMA
106 PsiBlast_CBE 60.7034% -0 - C3 -1OIN 3.1 BGLA_THEMA
102 PsiBlast_CBE 60.4634% -1 - C3 -1W3J 3.8 BGLA_THEMA
108 PsiBlast_CBE 60.4534% -0 - C3 -1OIM 4.1 BGLA_THEMA
91 PsiBlast_CBE 60.4334% -2 - C3 -2J77 4.1 BGLA_THEMA
86 PsiBlast_CBE 60.3634% 0 - C3 -2J7B 4.3 BGLA_THEMA
98 PsiBlast_CBE 60.3234% -2 - C3 -2CBV 3.8 BGLA_THEMA
101 PsiBlast_CBE 60.2734% -1 - C3 -1W3J 3.5 BGLA_THEMA
93 PsiBlast_CBE 60.2634% -5 - C3 -2J75 4.0 BGLA_THEMA
103 PsiBlast_CBE 60.2534% 2 - C3 -1UZ1 3.8 BGLA_THEMA
105 PsiBlast_CBE 60.1934% 0 - C3 -1OIN 3.9 BGLA_THEMA
95 PsiBlast_CBE 60.1434% -1 - C3 -2CES 4.3 BGLA_THEMA
96 PsiBlast_CBE 60.0434% -3 - C3 -2CES 4.8 BGLA_THEMA
107 PsiBlast_CBE 59.9334% 1 - C3 -1OIM 3.8 BGLA_THEMA
60 PsiBlast_CBE 59.9334% -3 - C3 -5N6T 4.3 ?
12 PsiBlast_PDB 59.7836% 19 - C3 -4ZEP 4.0 ?
100 PsiBlast_CBE 59.7334% -2 - C3 -2CBU 4.8 BGLA_THEMA
109 PsiBlast_CBE 59.6334% -1 - C3 -1OIF 3.4 BGLA_THEMA
104 PsiBlast_CBE 59.5234% -3 - C3 -1UZ1 3.6 BGLA_THEMA
31 PsiBlast_CBE 59.2536% 20 - C3 -4ZEP 3.8 ?
11 PsiBlast_PDB 59.2436% 17 - C3 -4ZEN 3.7 ?
32 PsiBlast_CBE 59.0536% 17 - C3 -4ZEN 3.5 ?
59 PsiBlast_CBE 58.3734% -3 - C3 -5N6T 4.1 ?
111 PsiBlast_CBE 56.2733% 2 - C3 -3CMJ 3.1 ?
17 PsiBlast_PDB 55.2133% 14 - C3 -1E4I 2.1 BGLA_PAEPO
19 PsiBlast_PDB 54.6534% 14 - C3 -1UYQ 2.4 BGLA_PAEPO
7 PsiBlast_PDB 54.2336% 47 - C3 -4PTX 3.7 ?
27 PsiBlast_CBE 54.0936% 45 - C3 -4PTX 3.6 ?