@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1087: (2018-01-04 )
MKKQEKLALVESALEDFYGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVAIKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDPYALIAQADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKTGKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDVTASFEEIGKTPQKDLQAEKSTYPALLGLEESIAFCNQTLDQANEKLEEIAQQVPFETESIVSVVESLRING

Atome Classification :

(57 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

IPE_B_7(4LFE)
?
[Raw transfer]



IPE_D_7(3KRC)
?
[Raw transfer]



IPR_A_9(1RQJ)
ISPA_ECOLI
[Raw transfer]



IPE_A_4(4LFG)
?
[Raw transfer]



IPE_B_9(4LFG)
?
[Raw transfer]



IPE_A_4(4LFG)
?
[Raw transfer]



GPP_D_9(3KRP)
?
[Raw transfer]



IPR_B_11(1RQJ)
ISPA_ECOLI
[Raw transfer]



RIS_B_12(1RQJ)
ISPA_ECOLI
[Raw transfer]



GOL_B_12(3M9U)
?
[Raw transfer]



RIS_A_10(1RQJ)
ISPA_ECOLI
[Raw transfer]



GOL_B_5(4F62)
?
[Raw transfer]



GOL_A_4(4F62)
?
[Raw transfer]



GOL_B_5(4F62)
?
[Raw transfer]



GOL_C_16(3M9U)
?
[Raw transfer]



IPE_A_5(3KRC)
?
[Raw transfer]



GOL_A_6(3M9U)
?
[Raw transfer]



PPV_A_3(3NPK)
?
[Raw transfer]



DST_D_6(3OAC)
?
[Raw transfer]



IPE_A_4(4LLT)
?
[Raw transfer]



GOL_A_4(4F62)
?
[Raw transfer]



DST_D_11(3KRF)
?
[Raw transfer]



IPE_A_4(3WJO)
?
[Raw transfer]



DST_A_10(1RQI)
ISPA_ECOLI
[Raw transfer]



GST_A_4(4LLS)
?
[Raw transfer]



DST_D_11(3OAB)
?
[Raw transfer]



DST_D_11(3OAB)
?
[Raw transfer]



IPE_A_7(3Q1O)
?
[Raw transfer]



IPE_B_9(4LLT)
?
[Raw transfer]



IPE_C_18(3Q1O)
?
[Raw transfer]



GOL_A_5(3Q2Q)
?
[Raw transfer]



DST_B_9(1RQI)
ISPA_ECOLI
[Raw transfer]



IPE_D_24(3Q1O)
?
[Raw transfer]



IPE_B_13(3Q1O)
?
[Raw transfer]



IPE_B_13(3Q1O)
?
[Raw transfer]



GST_B_9(4LLS)
?
[Raw transfer]



IPE_A_3(4LFE)
?
[Raw transfer]



DST_D_11(3KRO)
?
[Raw transfer]



IPE_B_7(3OYR)
?
[Raw transfer]



IPE_A_6(3PDE)
?
[Raw transfer]



IPE_A_6(3PDE)
?
[Raw transfer]



IPE_B_13(3PDE)
?
[Raw transfer]



IPE_C_15(3PDE)
?
[Raw transfer]



IPE_D_22(3PDE)
?
[Raw transfer]



IPE_D_22(3PDE)
?
[Raw transfer]



DST_A_6(3OAB)
?
[Raw transfer]



IPE_A_5(3KRO)
?
[Raw transfer]



PPV_A_5(3KRF)
?
[Raw transfer]



POP_A_3(3OYR)
?
[Raw transfer]



PPV_A_5(3KRP)
?
[Raw transfer]



PPV_A_6(3KRF)
?
[Raw transfer]
21 PsiBlast_CBE 82.6056% -12 - C1 -4LFG 5.2 ?
22 PsiBlast_CBE 81.9856% -13 - C1 -4LFE 5.1 ?
2 PsiBlast_PDB 80.7856% -17 - C1 -4LFG 5.4 ?
1 PsiBlast_PDB 80.3356% -32 - C1 -4LFE 3.1 ?
79 HHSearch 75.2456% 7 - C1 -4LFG 5.4 ?
4 PsiBlast_PDB 74.0744% -89 - C- -3P8L - ? -
69 HHSearch 67.9544% -44 - C- -3P8L - ? -
70 HHSearch 67.4744% -47 - C- -3P8L - ? -
71 HHSearch 65.8943% -49 - C- -1RTR - ? -
77 HHSearch 64.7841% -53 - C1 -3OAB 2.8 ?
68 HHSearch 64.6638% -84 - C1 -3LVS - ? -
3 PsiBlast_PDB 63.0345% -43 - C1 -1RTR - ? -
17 PsiBlast_PDB 62.8539%-111 - C1 -3NPK 3.5 ?
76 HHSearch 62.4939% -80 - C1 -3M0G - ? -
67 HHSearch 61.7342% -32 - C1 -5XN5 - ? -
62 HHSearch 61.3238% -36 - C1 -4F62 2.4 ?
78 HHSearch 61.0441% -69 - C1 -3KRA - ? -
74 HHSearch 60.7436% -76 - C1 -4KKM - ? -
72 HHSearch 60.6835% -33 - C1 -3Q1O 4.0 ?
16 PsiBlast_PDB 60.6441% -55 - C1 -4F62 2.4 ?
5 PsiBlast_PDB 58.6741% -26 - C1 -3M9U 2.8 ?
26 PsiBlast_CBE 58.6241% -31 - C1 -3M9U 2.3 ?
6 PsiBlast_PDB 57.9441% -29 - C1 -3PDE 3.1 ?
61 HHSearch 57.4136% -22 - C1 -3PDE 3.1 ?
27 PsiBlast_CBE 57.0141% -31 - C1 -3M9U 2.6 ?
25 PsiBlast_CBE 56.7441% -29 - C1 -3PDE 3.1 ?
60 HHSearch 55.6836% -18 * C1 *3PDE 3.0 ?
24 PsiBlast_CBE 55.5741% -35 - C1 -3PDE 3.4 ?
23 PsiBlast_CBE 55.2141% -26 - C1 -3PDE 3.0 ?
63 HHSearch 54.1238% -41 - C1 -4F62 2.4 ?
35 PsiBlast_CBE 54.0041% -59 - C1 -4F62 2.4 ?
10 PsiBlast_PDB 52.3344% -36 - C1 -3KRF 3.3 ?
11 PsiBlast_PDB 52.3144% -32 - C1 -3KRO 3.3 ?
12 PsiBlast_PDB 52.1744% -31 - C1 -3KRP 3.4 ?
30 PsiBlast_CBE 51.6744% -32 - C1 -3KRP 4.5 ?
13 PsiBlast_PDB 51.0344% -33 - C1 -3OAB 2.6 ?
9 PsiBlast_PDB 50.9444% -34 - C1 -3KRC 2.8 ?
51 PsiBlast_CBE 50.2535% -4 - C1 -3Q1O 4.1 ?
20 PsiBlast_PDB 50.0543% -35 - C1 -1RQI 3.4 ISPA_ECOLI
38 PsiBlast_CBE 50.0243% -37 - C1 -1RQI 3.9 ISPA_ECOLI
40 PsiBlast_CBE 49.8343% -36 - C1 -1RQJ 5.5 ISPA_ECOLI
39 PsiBlast_CBE 49.6743% -35 - C1 -1RQJ 4.9 ISPA_ECOLI
49 PsiBlast_CBE 49.5835% -9 - C1 -3Q1O 3.9 ?
31 PsiBlast_CBE 48.8344% -14 - C1 -3KRO 3.1 ?
50 PsiBlast_CBE 48.1635% -3 - C1 -3Q1O 4.0 ?
33 PsiBlast_CBE 47.3244% -38 - C1 -3KRC 3.8 ?
29 PsiBlast_CBE 47.2344% -12 - C1 -3OAB 2.8 ?
48 PsiBlast_CBE 47.1735% -5 - C1 -3Q1O 3.9 ?
32 PsiBlast_CBE 46.2544% -13 - C1 -3KRF 2.9 ?
28 PsiBlast_CBE 45.9244% -19 - C1 -3OAC 3.0 ?
37 PsiBlast_CBE 44.5641% -33 - C1 -4LLS 5.2 ?
19 PsiBlast_PDB 44.3641% -33 - C1 -4LLT 3.8 ?
36 PsiBlast_CBE 43.4341% -33 - C1 -4LLT 3.4 ?
18 PsiBlast_PDB 43.2841% -32 - C1 -4LLS 5.7 ?
57 PsiBlast_CBE 32.7931% -91 - C1 -3Q2Q 2.3 ?
55 PsiBlast_CBE 32.6733% -68 - C1 -3WJO 2.5 ?
58 PsiBlast_CBE 18.8234% -6 - C1 -3OYR 3.4 ?