@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1090: (2018-01-04 )
MQNRPIIIGVTGGSGGGKTSVSRAILSHFPDEKISMIEHDSYYKDQSHLTFEERVKTNYDHPFAFDTDLMIEQIKELLAGRPVDIPTYDYTEHTRSSKTYRQEPQDVFIVEGILVLEDKRLRDLMDIKIFVDTDDDVRIIRRIKRDMEERGRSLDSVINQYLGVVKPMYHQFIESTKRYADIVIPEGVSNTVAIDLLTTKIAKILEEARNSK

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CTP_D_4(1UDW)
UCK2_HUMAN
[Raw transfer]




CTP_C_3(1UDW)
UCK2_HUMAN
[Raw transfer]




UTP_C_3(1UEI)
UCK2_HUMAN
[Raw transfer]




UTP_D_4(1UEI)
UCK2_HUMAN
[Raw transfer]




C5P_A_5(1XRJ)
UCK2_HUMAN
[Raw transfer]




C5P_B_4(3ASZ)
URK_THET8
[Raw transfer]




C5P_A_3(3ASZ)
URK_THET8
[Raw transfer]




C5P_B_4(3ASZ)
URK_THET8
[Raw transfer]




ACP_B_6(3W34)
URK_THET8
[Raw transfer]




CTN_D_4(1UEJ)
UCK2_HUMAN
[Raw transfer]




ACP_B_6(3W34)
URK_THET8
[Raw transfer]




ACP_A_4(3W34)
URK_THET8
[Raw transfer]




CTN_C_3(1UEJ)
UCK2_HUMAN
[Raw transfer]




CTN_A_3(3W8R)
URK_THET8
[Raw transfer]




ADP_A_5(2UVQ)
UCK1_HUMAN
[Raw transfer]




ADP_A_5(2UVQ)
UCK1_HUMAN
[Raw transfer]




CIT_F_6(1UEJ)
UCK2_HUMAN
[Raw transfer]




ACP_B_6(3W8R)
URK_THET8
[Raw transfer]




CIT_E_5(1UEJ)
UCK2_HUMAN
[Raw transfer]




ADP_B_8(1XRJ)
UCK2_HUMAN
[Raw transfer]




34 HHSearch 94.2148%-112 * C1 *3W34 3.9 URK_THET8
35 HHSearch 92.3448%-107 - C1 -3ASZ 6.6 URK_THET8
21 PsiBlast_CBE 87.7151% -95 - C1 -3W8R 3.9 URK_THET8
3 PsiBlast_PDB 87.3650% -99 - C1 -3ASZ 7.9 URK_THET8
22 PsiBlast_CBE 87.2550% -97 - C1 -3W34 3.9 URK_THET8
4 PsiBlast_PDB 86.5650% -90 - C1 -3W34 3.4 URK_THET8
1 PsiBlast_PDB 86.1251% -91 - C1 -3W8R 6.4 URK_THET8
2 PsiBlast_PDB 85.7550%-100 - C1 -3ASY - URK_THET8 -
23 PsiBlast_CBE 85.1450% -92 - C1 -3ASZ 6.6 URK_THET8
11 PsiBlast_PDB 81.5241% -12 - C1 -2JEO - UCK1_HUMAN -
12 PsiBlast_PDB 79.5341% -15 - C1 -2UVQ 6.3 UCK1_HUMAN
5 PsiBlast_PDB 79.4140% 7 - C1 -1XRJ 9.5 UCK2_HUMAN
24 PsiBlast_CBE 79.0240% 1 - C1 -1XRJ 5.4 UCK2_HUMAN
9 PsiBlast_PDB 78.7840% 10 - C1 -1UFQ - UCK2_HUMAN -
10 PsiBlast_PDB 78.3640% -0 - C1 -1UJ2 - UCK2_HUMAN -
25 PsiBlast_CBE 77.0240% 6 - C1 -1UJ2 - UCK2_HUMAN -
7 PsiBlast_PDB 75.7140% 3 - C1 -1UEI 10.0 UCK2_HUMAN
39 HHSearch 75.2241% 37 - C1 -2JEO - UCK1_HUMAN -
6 PsiBlast_PDB 74.4940% 8 - C1 -1UDW 9.8 UCK2_HUMAN
27 PsiBlast_CBE 74.2540% 26 - C1 -1UEI 10.1 UCK2_HUMAN
28 PsiBlast_CBE 74.1940% 29 - C1 -1UDW 10.2 UCK2_HUMAN
26 PsiBlast_CBE 72.8540% 35 - C1 -1UEJ 7.2 UCK2_HUMAN
8 PsiBlast_PDB 72.8140% 31 - C1 -1UEJ 6.9 UCK2_HUMAN
54 Fugue 70.6740% 40 - C1 -2UVQ 6.3 UCK1_HUMAN