@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1099: (2018-01-04 )
MQDKNLVNVNLTKEMKASFIDYAMSVIVARALPDVRDGLKPVHRRILYGMNELGVTPDKPHKKSARITGDVMGKYHPHGDSSIYEAMVRMAQWWSYRYMLVDGHGNFGSMDGDSAAAQRYTEARMSKIALEMLRDINKNTVDFVDNYDANEREPLVLPARFPNLLVNGATGIAVGMATNIPPHNLGETIDAVKLVMDNPEVTTKDLMEVLPGPDFPTGALVMGKSGIHKAYETGKGSIVLRSRTEIETTKTGRERIVVTEFPYMVNKTKVHEHIVRLVQEKRIEGITAVRDESNREGVRFVIEVKRDASANVILNNLFKMTQMQTNFGFNMLAIQNGIPKILSLRQILDAYIEHQKEVVVRRTRFDKEKAEARAHILEGLLIALDHIDEVIRIIRASETDAEAQAELMSKFKLSERQSQAILDMRLRRLTGLERDKIQSEYDDLLALIADLADILAKPERVSQIIKDELDEVKRKFSDKRRTELMVGQVLSLEDEDLIEESDVLITLSNRGYIKRLDQDEFTAQKRGGRGVQGTGVKDDDFVRELVSTSTHDHLLFFTNKGRVYRLKGYEIPEYGRTAKGLPVVNLLKLDEDESIQTVINVESDRSDDAYLFFTTRHGIVKRTSVKEFANIRQNGLKALNLKDEDELINVLLAEGDMDIIIGTKFGYAVRFNQSAVRGMSRIATGVKGVNLREGDTVVGASLITDQDEVLIITEKGYGKRTVATEYPTKGRGGKGMQTAKITEKNGLLAGLMTVQGDEDLMIITDTGVMIRTNLANISQTGRATMGVKVMRLDQDAQIVTFTTVAVAEKEEVGTENETEGEA

Atome Classification :

(74 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NACID_E_5(3RAD)
PARC_STRPN
[Raw transfer]
-
NACID_F_7(5CDM)
GYRA_STAAN
[Raw transfer]
-
GOL_A_4(3ILW)
GYRA_MYCTU
[Raw transfer]



GOL_A_4(3ILW)
GYRA_MYCTU
[Raw transfer]



GOL_B_8(3ILW)
GYRA_MYCTU
[Raw transfer]



NACID_H_8(3RAE)
PARC_STRPN
[Raw transfer]
-
NACID_H_8(3RAF)
PARC_STRPN
[Raw transfer]
-
NACID_H_8(3LTN)
PARC_STRPN
[Raw transfer]
-
NACID_H_8(5CDP)
GYRA_STAAN
[Raw transfer]
-
SM8_A_5(2Y3P)
GYRA_ECOLI
[Raw transfer]



NACID_H_8(3K9F)
PARC_STRPN
[Raw transfer]
-
NACID_H_8(3RAD)
PARC_STRPN
[Raw transfer]
-
SM8_B_8(2Y3P)
GYRA_ECOLI
[Raw transfer]



TR6_H_11(4Z2E)
?
[Raw transfer]



MPD_B_5(3IFZ)
GYRA_MYCTU
[Raw transfer]



MFX_H_10(3FOF)
PARC_STRPN
[Raw transfer]



NACID_H_6(2XCT)
GYRA_STAAN
[Raw transfer]
-
MPD_A_3(3IFZ)
GYRA_MYCTU
[Raw transfer]



NACID_G_5(4I3H)
?
[Raw transfer]
-
NACID_E_5(3FOF)
PARC_STRPN
[Raw transfer]
-
NACID_G_6(5CDP)
GYRA_STAAN
[Raw transfer]
-
NACID_C_6(5NPP)
?
[Raw transfer]
-
NACID_F_4(2XCR)
GYRA_STAAN
[Raw transfer]
-
NACID_F_4(2XCR)
GYRA_STAAN
[Raw transfer]
-
NACID_F_6(3RAE)
PARC_STRPN
[Raw transfer]
-
NACID_F_6(3RAF)
PARC_STRPN
[Raw transfer]
-
NACID_A_4(5NPP)
?
[Raw transfer]
-
NACID_F_6(3K9F)
PARC_STRPN
[Raw transfer]
-
NACID_F_4(2XCR)
GYRA_STAAN
[Raw transfer]
-
NACID_G_5(2XCT)
GYRA_STAAN
[Raw transfer]
-
NACID_F_6(5IWM)
GYRA_STAAN
[Raw transfer]
-
NACID_F_4(5BS3)
GYRA_STAAU
[Raw transfer]
-
NACID_E_5(5IWI)
GYRA_STAAN
[Raw transfer]
-
NACID_E_3(4BUL)
GYRA_STAAN
[Raw transfer]
-
NACID_E_5(5IWI)
GYRA_STAAN
[Raw transfer]
-
NACID_X_11(2XCT)
GYRA_STAAN
[Raw transfer]
-
NACID_F_4(5BS3)
GYRA_STAAU
[Raw transfer]
-
NACID_F_6(3RAD)
PARC_STRPN
[Raw transfer]
-
NACID_F_2(4PLB)
GYRA_STAAU
[Raw transfer]
-
NACID_F_7(5CDR)
GYRA_STAAN
[Raw transfer]
-
NACID_G_7(3KSA)
PARC_STRPN
[Raw transfer]
-
NACID_G_6(5CDN)
GYRA_STAAN
[Raw transfer]
-
NACID_E_5(5IWI)
GYRA_STAAN
[Raw transfer]
-
NACID_F_6(3LTN)
PARC_STRPN
[Raw transfer]
-
NACID_F_7(5CDR)
GYRA_STAAN
[Raw transfer]
-
NACID_F_4(2XCS)
GYRA_STAAN
[Raw transfer]
-
NACID_W_8(2XCR)
GYRA_STAAN
[Raw transfer]
-
TR6_F_9(4Z2E)
?
[Raw transfer]



NACID_O_8(5CDN)
GYRA_STAAN
[Raw transfer]
-
NACID_P_16(5CDN)
GYRA_STAAN
[Raw transfer]
-
NACID_E_3(4BUL)
GYRA_STAAN
[Raw transfer]
-
NACID_F_2(4PLB)
GYRA_STAAU
[Raw transfer]
-
NACID_W_8(2XCR)
GYRA_STAAN
[Raw transfer]
-
NACID_N_14(5CDN)
GYRA_STAAN
[Raw transfer]
-
NACID_F_4(2XCS)
GYRA_STAAN
[Raw transfer]
-
NACID_F_6(3KSA)
PARC_STRPN
[Raw transfer]
-
NACID_G_5(4I3H)
?
[Raw transfer]
-
NACID_F_6(5IWM)
GYRA_STAAN
[Raw transfer]
-
NACID_E_5(3KSB)
PARC_STRPN
[Raw transfer]
-
NACID_F_6(5CDQ)
GYRA_STAAN
[Raw transfer]
-
NACID_E_5(3KSB)
PARC_STRPN
[Raw transfer]
-
NACID_W_12(5CDQ)
GYRA_STAAN
[Raw transfer]
-
NACID_Y_12(2XCT)
GYRA_STAAN
[Raw transfer]
-
NACID_W_12(5CDQ)
GYRA_STAAN
[Raw transfer]
-
NACID_F_6(5CDQ)
GYRA_STAAN
[Raw transfer]
-
NACID_N_8(5CDM)
GYRA_STAAN
[Raw transfer]
-
NACID_N_8(5CDM)
GYRA_STAAN
[Raw transfer]
-
NACID_F_6(5CDO)
GYRA_STAAN
[Raw transfer]
-
NACID_F_6(5CDO)
GYRA_STAAN
[Raw transfer]
-
NACID_W_12(5CDO)
GYRA_STAAN
[Raw transfer]
-
NACID_I_6(5CDM)
GYRA_STAAN
[Raw transfer]
-
NACID_W_12(5CDO)
GYRA_STAAN
[Raw transfer]
-
105 HHSearch 89.20100% -84 - C7 -4Z2C - ? -
1 PsiBlast_PDB 89.0099% -84 - C7 -4Z2C - ? -
3 PsiBlast_PDB 88.7099% -83 - C7 -4Z2E 2.6 ?
2 PsiBlast_PDB 88.5199% -84 - C7 -4Z2D - ? -
21 PsiBlast_CBE 85.8099% -88 - C7 -4Z2E 2.6 ?
29 PsiBlast_CBE 81.0066% 0 - C- -5NPK - ? -
13 PsiBlast_PDB 81.0066% 0 - C- -5NPK - ? -
18 PsiBlast_PDB 79.0266% -26 - C7 -5CDQ 4.7 GYRA_STAAN
17 PsiBlast_PDB 78.9066% -26 - C7 -5CDN 4.9 GYRA_STAAN (first)
27 PsiBlast_CBE 78.7766% -26 - C7 -5CDR 5.0 GYRA_STAAN
12 PsiBlast_PDB 78.4566% -23 - C7 -4BUL 5.4 GYRA_STAAN
9 PsiBlast_PDB 78.4066% -25 - C7 -5CDR 4.9 GYRA_STAAN
7 PsiBlast_PDB 78.3966% -22 - C7 -5IWM 4.9 GYRA_STAAN (first)
26 PsiBlast_CBE 78.2566% -22 - C7 -5IWI 5.1 GYRA_STAAN
25 PsiBlast_CBE 78.2566% -23 - C7 -5IWM 6.7 GYRA_STAAN
6 PsiBlast_PDB 78.2066% -23 - C7 -5IWI 6.0 GYRA_STAAN (first)
15 PsiBlast_PDB 78.1866% -26 - C7 -5BS3 5.1 GYRA_STAAU (first)
8 PsiBlast_PDB 78.1266% -23 - C7 -5CDP 4.1 GYRA_STAAN
106 HHSearch 78.0866% -22 - C7 -5IWI 6.0 GYRA_STAAN (first)
28 PsiBlast_CBE 78.0566% -23 - C7 -5CDP 5.4 GYRA_STAAN
45 PsiBlast_CBE 77.9166% -27 - C7 -5CDN 5.0 GYRA_STAAN (first)
10 PsiBlast_PDB 77.8866% -21 - C7 -2XCS 4.2 GYRA_STAAN (first)
5 PsiBlast_PDB 77.8466% -25 - C7 -5NPP 4.4 ?
34 PsiBlast_CBE 77.8266% -21 - C7 -2XCS 5.9 GYRA_STAAN (first)
36 PsiBlast_CBE 77.5866% -24 - C7 -4PLB 6.5 GYRA_STAAU (first)
42 PsiBlast_CBE 77.4166% -26 - C7 -5CDQ 4.6 GYRA_STAAN
30 PsiBlast_CBE 77.2966% -26 - C7 -4BUL 4.7 GYRA_STAAN
35 PsiBlast_CBE 77.1166% -26 - C7 -5BS3 6.4 GYRA_STAAU (first)
24 PsiBlast_CBE 77.0766% -25 - C7 -5NPP 4.2 ?
14 PsiBlast_PDB 76.9366% -24 - C7 -4PLB 4.9 GYRA_STAAU (first)
37 PsiBlast_CBE 76.8166% -25 - C7 -2XCR 3.8 GYRA_STAAN (first)
20 PsiBlast_PDB 76.7666% -30 - C7 -5CDO 4.7 GYRA_STAAN
111 HHSearch 76.6766% -25 - C7 -2XCR 5.2 GYRA_STAAN (first)
39 PsiBlast_CBE 76.4966% -25 - C7 -2XCR 5.2 GYRA_STAAN (first)
19 PsiBlast_PDB 76.4366% -23 - C7 -5CDM 3.5 GYRA_STAAN
107 HHSearch 76.3366% -22 * C7 *5CDM 3.5 GYRA_STAAN
33 PsiBlast_CBE 76.1666% -24 - C7 -2XCT 3.9 GYRA_STAAN
76 PsiBlast_CBE 75.9951% -75 - C7 -4I3H 3.8 ?
16 PsiBlast_PDB 75.7566% -21 - C7 -2XCR 4.5 GYRA_STAAN (first)
92 PsiBlast_CBE 75.6751% -78 - C7 -3RAD 3.7 PARC_STRPN
38 PsiBlast_CBE 75.5266% -23 - C7 -2XCR 4.4 GYRA_STAAN (first)
31 PsiBlast_CBE 75.4266% -26 - C7 -2XCT 3.7 GYRA_STAAN
89 PsiBlast_CBE 75.3451% -73 - C7 -3RAF 4.2 PARC_STRPN
11 PsiBlast_PDB 75.3266% -17 - C7 -2XCT 3.4 GYRA_STAAN
52 PsiBlast_CBE 75.2453% -42 - C7 -2Y3P 2.6 GYRA_ECOLI (first)
91 PsiBlast_CBE 75.1551% -78 - C7 -3RAE 3.4 PARC_STRPN
90 PsiBlast_CBE 75.1351% -77 - C7 -3RAE 4.4 PARC_STRPN
75 PsiBlast_CBE 75.0851% -79 - C7 -4I3H 5.3 ?
93 PsiBlast_CBE 74.6451% -72 - C7 -3RAD 4.4 PARC_STRPN
51 PsiBlast_CBE 74.4653% -44 - C7 -2Y3P 2.7 GYRA_ECOLI (first)
95 PsiBlast_CBE 74.4051% -76 - C7 -3LTN 4.0 PARC_STRPN
88 PsiBlast_CBE 74.3851% -77 - C7 -3RAF 3.9 PARC_STRPN
94 PsiBlast_CBE 74.2851% -76 - C7 -3LTN 3.6 PARC_STRPN
101 PsiBlast_CBE 74.0151% -74 - C7 -3K9F 4.2 PARC_STRPN
99 PsiBlast_CBE 74.0151% -82 - C7 -3KSA 4.5 PARC_STRPN
32 PsiBlast_CBE 74.0166% -22 - C7 -2XCT 3.5 GYRA_STAAN
100 PsiBlast_CBE 73.9451% -74 - C7 -3K9F 3.8 PARC_STRPN
98 PsiBlast_CBE 73.8551% -82 - C7 -3KSA 5.0 PARC_STRPN
97 PsiBlast_CBE 73.7351% -85 - C7 -3KSB 6.1 PARC_STRPN
96 PsiBlast_CBE 73.3651% -85 - C7 -3KSB 4.7 PARC_STRPN
53 PsiBlast_CBE 70.4454% 8 - C7 -3IFZ 3.2 GYRA_MYCTU
73 PsiBlast_CBE 69.9754% 11 - C7 -3ILW 2.8 GYRA_MYCTU
74 PsiBlast_CBE 69.6354% 10 - C7 -3ILW 2.7 GYRA_MYCTU
54 PsiBlast_CBE 69.5654% 4 - C7 -3IFZ 3.6 GYRA_MYCTU
109 HHSearch 69.4355% 9 - C7 -3ILW 2.7 GYRA_MYCTU
102 PsiBlast_CBE 65.3751% -76 - C7 -3FOF 4.4 PARC_STRPN
41 PsiBlast_CBE 60.7866% 7 - C7 -5CDQ 3.0 GYRA_STAAN
46 PsiBlast_CBE 59.7566% 8 - C7 -5CDO Error GYRA_STAAN
43 PsiBlast_CBE 59.6866% 11 - C7 -5CDN Error GYRA_STAAN
40 PsiBlast_CBE 59.4266% 9 - C7 -5CDQ Error GYRA_STAAN
44 PsiBlast_CBE 58.8566% 9 - C7 -5CDN Error GYRA_STAAN
48 PsiBlast_CBE 58.5666% 15 - C7 -5CDO 5.9 GYRA_STAAN
47 PsiBlast_CBE 57.8666% 13 - C7 -5CDO 3.5 GYRA_STAAN
49 PsiBlast_CBE 57.8466% 13 - C7 -5CDM Error GYRA_STAAN