@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1108: (2018-01-05 )
MLDLKEYGIVMWPEEKVISFREKLLAWYDENKRDLPWRRSKNPYHIWVSEIMLQQTRVDTVIPYYERFLDWFPTVESLATAPEESLLKAWEGLGYYSRVRNMQAAAQQIMTDFGGQFPNTYEGISSLKGIGPYTAGAISSIAFNLPEPAVDGNVMRVLARLFEVNHDIGIPSNRKIFQAMMEILINPDRPGDFNQALMDLGSDIESPVNPRPEESPVKDFSAAYQNGTMDRYPIKSPKKKPVPIYLKALVVKNSQGQFLLEKNESEKLLAGFWHFPFIEVDNFSQEEQFDLFHQVAEESVNFGPSPEESFQQDYDLDVDWLDVCFDTVQHVFSHRKWHVQIVAGQVSDFHDFSDREVRWLSPEEFKNYPLAKPQQKIWQAYAQANLDSSQD

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADE_A_3(1MUD)
MUTY_ECOLI
[Raw transfer]



ADE_A_6(1VRL)
MUTY_GEOSE
[Raw transfer]



GOL_A_9(1KG6)
MUTY_ECOLI
[Raw transfer]



NACID_C_2(1RRS)
MUTY_GEOSE
[Raw transfer]
-
IMD_A_4(1WEG)
MUTY_ECOLI
[Raw transfer]



GOL_A_7(1KG5)
MUTY_ECOLI
[Raw transfer]



IMD_A_4(1MUY)
MUTY_ECOLI
[Raw transfer]



GOL_C_6(4YOQ)
MUTY_GEOSE
[Raw transfer]



IMD_A_7(1MUN)
MUTY_ECOLI
[Raw transfer]



IMD_A_7(1MUN)
MUTY_ECOLI
[Raw transfer]



NACID_C_3(3G0Q)
MUTY_GEOSE
[Raw transfer]
-
NACID_C_3(3G0Q)
MUTY_GEOSE
[Raw transfer]
-
NACID_D_3(5KN9)
MUTY_GEOSE
[Raw transfer]
-
NACID_D_3(5KN8)
MUTY_GEOSE
[Raw transfer]
-
NACID_D_3(5KN8)
MUTY_GEOSE
[Raw transfer]
-
NACID_C_3(4YOQ)
MUTY_GEOSE
[Raw transfer]
-
NACID_C_3(4YPH)
MUTY_GEOSE
[Raw transfer]
-
NACID_C_3(3FSP)
MUTY_GEOSE
[Raw transfer]
-
NACID_C_2(5KN9)
MUTY_GEOSE
[Raw transfer]
-
NACID_C_2(5KN8)
MUTY_GEOSE
[Raw transfer]
-
EDO_A_3(1WEG)
MUTY_ECOLI
[Raw transfer]



NACID_E_5(4YPR)
MUTY_GEOSE
[Raw transfer]
-
NACID_C_3(4YPR)
MUTY_GEOSE
[Raw transfer]
-
NACID_B_1(1RRQ)
MUTY_GEOSE
[Raw transfer]
-
NACID_C_2(1VRL)
MUTY_GEOSE
[Raw transfer]
-
NACID_B_1(1RRQ)
MUTY_GEOSE
[Raw transfer]
-
NACID_C_3(5DPK)
MUTY_GEOSE
[Raw transfer]
-
31 HHSearch 86.9241% -97 * C3 *3G0Q 11.0 MUTY_GEOSE
9 PsiBlast_PDB 86.0540% -91 - C3 -4YPR 11.6 MUTY_GEOSE
55 Fugue 86.0340% -92 - C3 -1RRQ 12.6 MUTY_GEOSE
2 PsiBlast_PDB 85.2141% -93 - C3 -3FSP 11.3 MUTY_GEOSE
8 PsiBlast_PDB 85.1240% -91 - C3 -1RRQ 12.9 MUTY_GEOSE
7 PsiBlast_PDB 85.0540% -94 - C3 -4YPH 10.5 MUTY_GEOSE
1 PsiBlast_PDB 84.7641% -91 - C3 -5DPK 9.3 MUTY_GEOSE
6 PsiBlast_PDB 84.6240% -90 - C3 -4YOQ 10.5 MUTY_GEOSE
21 PsiBlast_CBE 84.1840% -87 - C3 -4YPR 12.6 MUTY_GEOSE
5 PsiBlast_PDB 83.9540% -89 - C3 -3G0Q 11.0 MUTY_GEOSE
3 PsiBlast_PDB 83.7740% -90 - C3 -1RRS 7.6 MUTY_GEOSE
4 PsiBlast_PDB 82.9840% -95 - C3 -1VRL 7.3 MUTY_GEOSE
35 HHSearch 79.3648%-105 - C3 -5KN8 3.7 MUTY_GEOSE
10 PsiBlast_PDB 77.7850%-105 - C3 -5KN8 4.3 MUTY_GEOSE
11 PsiBlast_PDB 76.3450%-102 - C3 -5KN9 3.9 MUTY_GEOSE
33 HHSearch 66.8944% -8 - C3 -1KQJ - MUTY_ECOLI -
13 PsiBlast_PDB 66.8843% -30 - C3 -1KG7 - MUTY_ECOLI -
23 PsiBlast_CBE 66.7543% -8 - C3 -1KQJ - MUTY_ECOLI -
14 PsiBlast_PDB 66.5643% -8 - C3 -1KG4 - MUTY_ECOLI -
24 PsiBlast_CBE 66.4844% -7 - C3 -1WEF - MUTY_ECOLI -
16 PsiBlast_PDB 65.7643% -5 - C3 -1KG5 2.3 MUTY_ECOLI
26 PsiBlast_CBE 65.4743% -5 - C3 -1MUD 3.3 MUTY_ECOLI
15 PsiBlast_PDB 64.6343% -6 - C3 -1WEG 4.0 MUTY_ECOLI
25 PsiBlast_CBE 64.3943% -6 - C3 -1MUN 4.1 MUTY_ECOLI
17 PsiBlast_PDB 63.9643% -5 - C3 -1MUY 3.6 MUTY_ECOLI
20 PsiBlast_PDB 63.9443% -10 - C3 -1KG6 2.1 MUTY_ECOLI
34 HHSearch 63.5344% -0 - C3 -1MUN 4.1 MUTY_ECOLI