@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1123: (2018-01-05 )
MGLFDRLFGKKEEPKIEEVVKEALENLDLSEDVDPTFTEVEEVSQEEAEVEIVEQAVFQEEEIQDTVEESLDLEPVVEVSQKEVEEFPHSEEGNTEFLETIEENNSEVLEPERPQAEETVQEKYDRSLKKTRTGFGARLNAFFANFRSVDEEFFEELEELLIMSDVGVQVASNLTEELRYEAKLENAKKPDALRRVIIEKLVELYEKDGSYDESIHFQDNLTVMLFVGVNGVGKTTSIGKLAHRYKQAGKKVMLVAADTFRAGAVAQLAEWGRRVDVPVVTGPEKADPASVVFDGMERAVAEGIDILMIDTAGRLQNKDNLMAELEKIGRIIKRVVPEAPHETFLALDASTGQNALVQAKEFSKITPLTGIVLTKIDGTARGGVVLAIREELNIPVKLIGFGEKIDDIGEFNSENFMKGLLEGLI

Atome Classification :

(63 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EDO_A_6(2J7P)
FTSY_THEAQ
[Raw transfer]



GDP_B_17(3DM5)
SRP54_PYRFU
[Raw transfer]



GCP_D_17(1OKK)
FTSY_THEAQ
[Raw transfer]



GCP_B_7(5L3R)
CFTSY_ARATH
[Raw transfer]



GDP_B_11(4C7O)
FTSY_ECOLI
[Raw transfer]



GDP_B_17(3DM5)
SRP54_PYRFU
[Raw transfer]



GDP_A_6(1O87)
SRP54_THEAQ
[Raw transfer]



GCP_B_6(1RJ9)
SRP54_THEAQ
[Raw transfer]



GCP_D_13(5L3R)
CFTSY_ARATH
[Raw transfer]



GNP_B_20(2J7P)
SRP54_THEAQ
[Raw transfer]



GNP_K_11(2Q9C)
FTSY_THEAQ
[Raw transfer]



GDP_B_6(5L3V)
SRP54_SULSO
[Raw transfer]



GCP_B_7(5L3R)
CFTSY_ARATH
[Raw transfer]



GNP_A_12(2J7P)
SRP54_THEAQ
[Raw transfer]



GNP_B_14(5L3Q)
SRP54_HUMAN
[Raw transfer]



GCP_B_7(5L3R)
SR54C_ARATH
[Raw transfer]



GCP_D_13(5L3R)
SR54C_ARATH
[Raw transfer]



GCP_D_13(5L3R)
SR54C_ARATH
[Raw transfer]



GNP_D_25(5L3Q)
SRP54_HUMAN
[Raw transfer]



GDP_A_3(5L3V)
SRP54_SULSO
[Raw transfer]



GCP_D_17(1OKK)
SRP54_THEAQ
[Raw transfer]



GDP_B_11(4C7O)
SRP54_ECOLI
[Raw transfer]



GDP_A_2(5L3W)
FTSY_SULAC
[Raw transfer]



GDP_C_14(4C7O)
FTSY_ECOLI
[Raw transfer]



GDP_A_2(5L3W)
FTSY_SULAC
[Raw transfer]



GOL_B_14(3DMD)
?
[Raw transfer]



GOL_C_16(3DMD)
?
[Raw transfer]



GOL_B_14(3DMD)
?
[Raw transfer]



GOL_A_15(3DMD)
?
[Raw transfer]



GCP_B_6(1RJ9)
FTSY_THEAQ
[Raw transfer]



GCP_A_3(1OKK)
FTSY_THEAQ
[Raw transfer]



GNP_B_20(2J7P)
FTSY_THEAQ
[Raw transfer]



GDP_A_8(4C7O)
FTSY_ECOLI
[Raw transfer]



CIT_B_4(1VMA)
?
[Raw transfer]



CIT_B_4(1VMA)
?
[Raw transfer]



FMT_A_5(1O87)
SRP54_THEAQ
[Raw transfer]



GNP_A_6(1JPN)
SRP54_THEAQ
[Raw transfer]



GNP_A_12(2J7P)
FTSY_THEAQ
[Raw transfer]



FMT_B_11(1O87)
SRP54_THEAQ
[Raw transfer]



GNP_B_2(1JPJ)
SRP54_THEAQ
[Raw transfer]



GNP_A_6(1JPN)
SRP54_THEAQ
[Raw transfer]



GNP_B_5(1JPN)
SRP54_THEAQ
[Raw transfer]



GNP_T_20(2Q9B)
FTSY_THEAQ
[Raw transfer]



OXY_A_3(1LS1)
SRP54_THEAQ
[Raw transfer]



GDP_B_12(1O87)
SRP54_THEAQ
[Raw transfer]



GDP_C_2(3E70)
?
[Raw transfer]



GDP_C_2(3E70)
?
[Raw transfer]



GDP_A_7(1NG1)
SRP54_THEAQ
[Raw transfer]



GDP_D_2(2IYL)
FTSY_THEAQ
[Raw transfer]



EDO_A_2(2YHS)
FTSY_ECOLI
[Raw transfer]



GDP_D_18(4C7O)
SRP54_ECOLI
[Raw transfer]



GDP_D_18(4C7O)
SRP54_ECOLI
[Raw transfer]



EDO_D_4(2NG1)
SRP54_THEAQ
[Raw transfer]



GDP_D_18(4C7O)
FTSY_ECOLI
[Raw transfer]



EDO_B_13(3NG1)
SRP54_THEAQ
[Raw transfer]



AMP_C_22(5L3Q)
SRP54_HUMAN
[Raw transfer]



AMP_A_9(5L3Q)
SRP54_HUMAN
[Raw transfer]



EDO_A_11(3NG1)
SRP54_THEAQ
[Raw transfer]



ACY_B_7(1JPN)
SRP54_THEAQ
[Raw transfer]



ACY_A_9(1JPN)
SRP54_THEAQ
[Raw transfer]
142 HHSearch 92.9247%-122 - C7 -1VMA 3.8 ?
138 HHSearch 89.9844%-124 - C7 -2YHS 2.5 FTSY_ECOLI
151 HHSearch 88.0745%-135 - C7 -3ZN8 - FTSY_ECOLI -
23 PsiBlast_CBE 85.8446% -47 - C7 -1VMA 3.8 ?
9 PsiBlast_PDB 85.4246% -48 - C7 -1VMA - ? -
4 PsiBlast_PDB 83.8046% -40 - C7 -2QY9 - FTSY_ECOLI -
7 PsiBlast_PDB 83.2646% -51 - C7 -3ZN8 - FTSY_ECOLI -
6 PsiBlast_PDB 83.1446% -45 - C7 -1FTS - FTSY_ECOLI -
3 PsiBlast_PDB 83.0746% -43 - C7 -2YHS - FTSY_ECOLI -
128 Fugue 81.6127% -89 - C7 -2J37 - SRP54_CANLF -
22 PsiBlast_CBE 81.5047% -33 - C7 -4C7O 3.3 FTSY_ECOLI
8 PsiBlast_PDB 81.2147% -32 - C7 -4C7O 7.0 FTSY_ECOLI
21 PsiBlast_CBE 80.7946% -39 - C7 -2XXA - FTSY_ECOLI -
5 PsiBlast_PDB 80.7546% -38 - C7 -2XXA - FTSY_ECOLI -
1 PsiBlast_PDB 78.7043% -0 - C7 -1ZU4 - FTSY_MYCMS -
148 HHSearch 77.7744% 8 - C7 -1ZU4 - FTSY_MYCMS -
137 HHSearch 76.1037% -54 - C7 -2OG2 - CFTSY_ARATH -
140 HHSearch 76.0440% -56 - C7 -5L3R 8.4 CFTSY_ARATH
2 PsiBlast_PDB 75.9943% 4 - C7 -1ZU5 - FTSY_MYCMS -
60 PsiBlast_CBE 75.1034%-100 - C7 -2CNW - SRP54_THEAQ -
54 PsiBlast_CBE 74.3131%-129 - C7 -5L3Q 3.8 SRP54_HUMAN
62 PsiBlast_CBE 74.3034%-101 - C7 -1OKK 3.1 SRP54_THEAQ
58 PsiBlast_CBE 74.3034% -99 - C7 -2J7P 9.3 SRP54_THEAQ
63 PsiBlast_CBE 74.2934%-102 - C7 -1NG1 7.6 SRP54_THEAQ
53 PsiBlast_CBE 74.0631%-131 - C7 -5L3Q 3.8 SRP54_HUMAN
71 PsiBlast_CBE 73.9034%-101 - C7 -1O87 7.1 SRP54_THEAQ
12 PsiBlast_PDB 73.7651%-113 - C7 -2J7P 2.9 FTSY_THEAQ
56 PsiBlast_CBE 73.6434%-104 - C7 -3NG1 3.5 SRP54_THEAQ
55 PsiBlast_CBE 73.5234%-104 - C7 -3NG1 3.5 SRP54_THEAQ
81 PsiBlast_CBE 73.2434%-100 - C7 -2NG1 2.5 SRP54_THEAQ
74 PsiBlast_CBE 73.2334%-100 - C7 -1JPJ 7.6 SRP54_THEAQ
57 PsiBlast_CBE 73.2134%-103 - C7 -2J7P 9.3 SRP54_THEAQ
14 PsiBlast_PDB 73.1551%-134 - C7 -2IYL 6.0 FTSY_THEAQ
20 PsiBlast_PDB 73.0751%-115 - C7 -1OKK 8.1 FTSY_THEAQ
30 PsiBlast_CBE 73.0240% -10 - C7 -5L3R 8.9 CFTSY_ARATH
24 PsiBlast_CBE 72.9851%-115 - C7 -2J7P 2.9 FTSY_THEAQ
19 PsiBlast_PDB 72.8740% -11 - C7 -5L3R 8.4 CFTSY_ARATH
17 PsiBlast_PDB 72.8251%-126 - C7 -2Q9B 4.9 FTSY_THEAQ
70 PsiBlast_CBE 72.8134% -96 - C7 -1O87 7.0 SRP54_THEAQ
82 PsiBlast_CBE 72.6934%-102 - C7 -1RJ9 9.4 SRP54_THEAQ
31 PsiBlast_CBE 72.5250%-116 - C7 -1RJ9 2.9 FTSY_THEAQ
72 PsiBlast_CBE 72.4634%-102 - C7 -1JPN 6.5 SRP54_THEAQ
18 PsiBlast_PDB 72.2751%-125 - C7 -2Q9C 5.3 FTSY_THEAQ
73 PsiBlast_CBE 72.2134%-102 - C7 -1JPN 7.5 SRP54_THEAQ
154 HHSearch 66.7033% -31 - C7 -5L3R 2.9 SR54C_ARATH
144 HHSearch 66.5737% -15 - C7 -3E70 7.0 ?
37 PsiBlast_CBE 66.1634% 27 - C7 -3DM5 Error SRP54_PYRFU
49 PsiBlast_CBE 64.8333% 9 - C7 -5L3W 6.9 FTSY_SULAC
141 HHSearch 63.6131% 33 - C7 -4C7O 4.0 SRP54_ECOLI
51 PsiBlast_CBE 63.4733% -2 - C7 -5L3R 2.9 SR54C_ARATH
50 PsiBlast_CBE 63.3033% -6 - C7 -5L3R 2.9 SR54C_ARATH
158 HHSearch 63.2735% 39 - C7 -1JPN 7.5 SRP54_THEAQ
143 HHSearch 63.2237% 36 - C7 -3DMD 3.4 ?
149 HHSearch 63.2034% 31 - C7 -5L3W 6.9 FTSY_SULAC
42 PsiBlast_CBE 62.4633% 75 - C7 -5L3V 8.5 SRP54_SULSO
36 PsiBlast_CBE 62.3834% 35 - C7 -3DM5 7.0 SRP54_PYRFU
33 PsiBlast_CBE 62.3637% 42 - C7 -3DMD 2.3 ?
87 PsiBlast_CBE 62.0037% -19 - C7 -4C7O 4.0 SRP54_ECOLI
34 PsiBlast_CBE 61.6837% 41 - C7 -3DMD 3.4 ?
43 PsiBlast_CBE 61.5433% 75 - C7 -5L3V 7.5 SRP54_SULSO
88 PsiBlast_CBE 61.2737% -19 - C7 -4C7O 3.2 SRP54_ECOLI
35 PsiBlast_CBE 60.9237% 42 - C7 -3DMD 2.3 ?
32 PsiBlast_CBE 60.1437% 42 - C7 -3E70 7.1 ?