@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1128: (2018-01-05 )
MLNEFPIFDYEDIQLIPNKCVIKSRAEADTSVTLGNHTFKLPVVPANMQTILDENVAEQLAKGGYFYIMHRFDEAGRIPFIKRMHDQGLIASISVGVKDYEYDFVSQLKADAPEYITIDIAHGHADSVISMIQHIKKELPDTFVIAGNVGTPEAVRELENAGADATKVGIGPGKVCITKVKTGFGTGGWQLAALRWCAKAARKPIIADGGIRTHGDIAKSIRFGASMIMIGSLFAGHIESPGKTIEVDGEQFKEYYGSASQYQKGAYKNVEGKRILLPAKGHLQDTLTEMEQDLQSAISYAGGRQVADLKHVDYVIVKNSIWNGDASH

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

IMP_C_19(4MY8)
?
[Raw transfer]



IMP_A_3(5AHM)
?
[Raw transfer]



5GP_A_13(2A7R)
GMPR2_HUMAN
[Raw transfer]



5GP_A_2(2A1Y)
GUAC_BACAN
[Raw transfer]



5GP_A_2(2A1Y)
GUAC_BACAN
[Raw transfer]



XMP_A_2(5UPX)
?
[Raw transfer]



NAD_A_4(4X3Z)
?
[Raw transfer]



6Q9_A_2(5K4X)
?
[Raw transfer]



2EY_A_4(4MYA)
?
[Raw transfer]



FMT_B_12(4FEZ)
?
[Raw transfer]



Q21_B_13(4MY8)
?
[Raw transfer]



39H_B_8(4QM1)
?
[Raw transfer]



2EY_B_8(4MYA)
?
[Raw transfer]



CPR_A_3(1B3O)
IMDH2_HUMAN
[Raw transfer]



IMP_A_2(5AHN)
?
[Raw transfer]



Q21_B_18(4MY8)
?
[Raw transfer]



39H_C_10(4QM1)
?
[Raw transfer]
119 HHSearch 87.8974% -41 - C1 -2A1Y 5.9 GUAC_BACAN
1 PsiBlast_PDB 87.1674% -37 - C1 -2A1Y 5.9 GUAC_BACAN
52 PsiBlast_CBE 69.1234% -31 - C1 -4QM1 3.9 ?
54 PsiBlast_CBE 68.7634% -25 - C1 -4QM1 - ? -
47 PsiBlast_CBE 68.1834% -27 - C1 -5URR - ? -
44 PsiBlast_CBE 66.9534% -28 - C1 -5URS - ? -
42 PsiBlast_CBE 66.8334% -24 - C1 -5URS - ? -
41 PsiBlast_CBE 66.4734% -27 - C1 -5URS - ? -
50 PsiBlast_CBE 66.4534% -29 - C1 -5URR - ? -
32 PsiBlast_CBE 66.3334% -25 - C1 -5UUW - ? -
66 PsiBlast_CBE 66.2034% -27 - C1 -4MY9 - ? -
70 PsiBlast_CBE 66.1734% -29 - C1 -4MY8 - ? -
6 PsiBlast_PDB 66.1734% -28 - C1 -4MYX - ? -
59 PsiBlast_CBE 66.1334% -31 - C1 -4MYX - ? -
48 PsiBlast_CBE 66.0434% -28 - C1 -5URR - ? -
31 PsiBlast_CBE 65.9834% -27 - C1 -5UUW - ? -
12 PsiBlast_PDB 65.5034% -25 - C1 -5UUZ - ? -
8 PsiBlast_PDB 65.4934% -28 - C1 -5URR - ? -
62 PsiBlast_CBE 65.3334% -22 - C1 -4MYA 3.6 ?
73 PsiBlast_CBE 65.1934% -27 - C1 -4MY1 - ? -
126 HHSearch 60.1032% -14 - C1 -4FEZ 3.1 ?
136 HHSearch 59.9531% -20 - C1 -5AHN 4.7 ?
129 HHSearch 58.0031% 5 - C1 -5AHM 6.2 ?
130 HHSearch 57.7632% -3 - C1 -5K4X 3.2 ?