Binding Site Information :
Doc...
Information extracted from the bests complexes created by comparative docking.



Prediction Binding Site :


Binding Site Prediction
[Download fasta file] - [Download text file]

Binding Site Number :C6_S1
Best Complexes choosen after comparative docking [pKd > 3] : 4 (5 maxi)

Complexes [Theoretical pKd]FileVolume (A3)
(FPocket)
Hydrophobicity
Score(FPocket)
Contacts Ligand/Receptor [<4A] in Site C6_S1
Complex: NAD_B_18(4WUO) / Model_40(4WUO/B) = [8.1] Download1566.899.38MAKKIVALVGDGIGPEIMEAGLEVLEALAEKTGFDYEIDRRPFGGADIDAAGPPLPDETLKASREADAILLVAIGSPQYDGVAVRPEQGLMALRKELNLYANIRPVKIFDSLKYLSPLKPERISGVDFVVVRELTGEIYFGDHILEERKARDINDYSYEEVERIIRKAFEIARNRRKIVTSIDKQNVLATSKLWRKVAEEVAQDFPDVTLEHQLVDSAAMLMITNPAKFDVIVTENLFGDILSDESSVLSGTLGVMPSASHSENGPSLYEPIHGSAPDIAGQGIANPISMILSVVMMLRDSFGRYEDTERIKRAVETSLAAGILTRDIGGQASTKEMMEAIIARL
Complex: IPM_A_5(1A05) / Model_162(1A05/A) = [3.6] Download586.132.29MAKKIVALVGDGIGPEIMEAGLEVLEALAEKTGFDYEIDRRPFGGADIDAAGPPLPDETLKASREADAILLVAIGSPQYDGVAVRPEQGLMALRKELNLYANIRPVKIFDSLKYLSPLKPERISGVDFVVVRELTGEIYFGDHILEERKARDINDYSYEEVERIIRKAFEIARNRRKIVTSIDKQNVLATSKLWRKVAEEVAQDFPDVTLEHQLVDSAAMLMITNPAKFDVIVTENLFGDILSDESSVLSGTLGVMPSASHSENGPSLYEPIHGSAPDIAGQGIANPISMILSVVMMLRDSFGRYEDTERIKRAVETSLAAGILTRDIGGQASTKEMMEAIIARL
Complex: 48Y_A_2(5HN4) / Model_95(5HN4/A) = [3.4] Download833.608.11MAKKIVALVGDGIGPEIMEAGLEVLEALAEKTGFDYEIDRRPFGGADIDAAGPPLPDETLKASREADAILLVAIGSPQYDGVAVRPEQGLMALRKELNLYANIRPVKIFDSLKYLSPLKPERISGVDFVVVRELTGEIYFGDHILEERKARDINDYSYEEVERIIRKAFEIARNRRKIVTSIDKQNVLATSKLWRKVAEEVAQDFPDVTLEHQLVDSAAMLMITNPAKFDVIVTENLFGDILSDESSVLSGTLGVMPSASHSENGPSLYEPIHGSAPDIAGQGIANPISMILSVVMMLRDSFGRYEDTERIKRAVETSLAAGILTRDIGGQASTKEMMEAIIARL
Complex: ICT_A_2(5HN5) / Model_94(5HN5/A) = [3.2] Download789.408.11MAKKIVALVGDGIGPEIMEAGLEVLEALAEKTGFDYEIDRRPFGGADIDAAGPPLPDETLKASREADAILLVAIGSPQYDGVAVRPEQGLMALRKELNLYANIRPVKIFDSLKYLSPLKPERISGVDFVVVRELTGEIYFGDHILEERKARDINDYSYEEVERIIRKAFEIARNRRKIVTSIDKQNVLATSKLWRKVAEEVAQDFPDVTLEHQLVDSAAMLMITNPAKFDVIVTENLFGDILSDESSVLSGTLGVMPSASHSENGPSLYEPIHGSAPDIAGQGIANPISMILSVVMMLRDSFGRYEDTERIKRAVETSLAAGILTRDIGGQASTKEMMEAIIARL
Consensus
[pKd Mean = 4.58]
-944
(s=371)
6
(s=2)
MAKKIVALVGDGIGPEIMEAGLEVLEALAEKTGFDYEIDRRPFGGADIDAAGPPLPDETLKASREADAILLVAIGSPQYDGVAVRPEQGLMALRKELNLYANIRPVKIFDSLKYLSPLKPERISGVDFVVVRELTGEIYFGDHILEERKARDINDYSYEEVERIIRKAFEIARNRRKIVTSIDKQNVLATSKLWRKVAEEVAQDFPDVTLEHQLVDSAAMLMITNPAKFDVIVTENLFGDILSDESSVLSGTLGVMPSASHSENGPSLYEPIHGSAPDIAGQGIANPISMILSVVMMLRDSFGRYEDTERIKRAVETSLAAGILTRDIGGQASTKEMMEAIIARL



Statistical distribution of contacts between receptors and ligands in all complexes :
(only contacts < 8A are taken into consideration)


Res_NameRes_NumRes_AtNb_ContactsNb_ComplexesNb[At_Ligand]
ASP11OD2442[O], 2[C],
ILE13CD11945[O], 5[N], 8[C], 1[P],
ILE13CG11847[C], 1[P], 5[N], 5[O],
ILE13CG21447[C], 2[O], 5[N],
ILE17CG2744[C], 3[N],
ILE17CG1241[C], 1[N],
ILE17CD1543[N], 2[C],
PHE43CE2341[C], 1[N], 1[O],
PHE43CD2141[O],
PHE43CZ141[O],
LEU71CD2341[N], 1[O], 1[C],
LEU71CD1341[C], 1[O], 1[N],
LEU71CG341[N], 1[O], 1[C],
VAL72CG1141[O],
ILE74CG117410[C], 2[N], 5[O],
ILE74CD11642[N], 4[O], 10[C],
ILE74CG21142[N], 3[O], 6[C],
SER76OG1346[O], 7[C],
PRO77CD643[O], 3[C],
PRO77CG141[O],
TYR79CE2441[C], 3[O],
TYR79CG141[O],
TYR79CE1141[O],
TYR79CZ443[O], 1[C],
TYR79CD2241[O], 1[C],
ASP80OD1642[O], 4[C],
ASP80CG442[O], 2[C],
ASP80OD2342[C], 1[O],
ARG85CG342[O], 1[C],
ARG85CZ543[C], 2[O],
ARG85NE341[C], 2[O],
PRO86CD1247[O], 5[C],
PRO86CG22410[O], 12[C],
GLU87CD21415[C], 1[N], 5[O],
GLU87OE118412[C], 5[O], 1[N],
GLU87OE220414[C], 5[O], 1[N],
GLU87CG26417[C], 2[N], 7[O],
GLN88CD141[C],
GLN88CG141[C],
GLN88NE2242[C],
LEU90CG4542[N], 19[O], 24[C],
LEU90CD248420[O], 2[N], 26[C],
LEU90CD131422[C], 1[N], 8[O],
MET91CE23410[O], 13[C],
MET91CG28416[C], 12[O],
MET91SD27412[O], 15[C],
ARG94CD29416[C], 12[O], 1[N],
ARG94CZ42422[C], 1[N], 19[O],
ARG94NE36416[O], 1[N], 19[C],
ARG94CG1145[C], 6[O],
ASN102CG1243[C], 9[O],
ASN102ND21849[O], 9[C],
ASN102OD11243[C], 9[O],
ARG104CZ31415[O], 1[N], 15[C],
ARG104NE25412[O], 1[N], 12[C],
ARG104CD1148[O], 3[C],
ARG104CG946[O], 3[C],
ARG132CG841[C], 7[O],
ARG132CD25413[O], 12[C],
ARG132CZ31416[C], 15[O],
ARG132NE27415[O], 12[C],
LEU134CG642[C], 4[O],
LEU134CD21042[C], 8[O],
LEU134CD1844[O], 4[C],
ILE138CD1341[C], 2[O],
TYR139CE238419[C], 19[O],
TYR139CE128416[C], 12[O],
TYR139CD11246[O], 6[C],
TYR139CZ36417[O], 19[C],
TYR139CD226410[O], 16[C],
TYR139CG1549[C], 6[O],
PHE140CE2141[O],
PHE140CZ141[O],
ASN236OD121412[O], 9[C],
ASN236CG943[C], 6[O],
ASN236ND2943[C], 6[O],
LEU237CD1947[O], 2[C],
LEU237CG242[O],
ASP240CG36420[C], 16[O],
ASP240OD237417[O], 20[C],
ASP240OD141418[O], 23[C],
SER243OG1349[O], 4[C],
ASP244OD131415[C], 1[P], 15[O],
ASP244CG27414[O], 11[C], 2[P],
ASP244OD229412[C], 2[P], 15[O],
SER247OG141[O],
THR252CG2743[N], 4[C],
THR252OG11341[O], 5[N], 7[C],
LEU253CG23411[C], 1[P], 5[N], 6[O],
LEU253CD23145[N], 11[O], 2[P], 13[C],
LEU253CD11748[C], 1[P], 2[N], 6[O],
SER258OG845[O], 1[N], 2[C],
SER260OG343[O],
LEU268CD2141[N],
GLU270OE23441[N], 13[O], 20[C],
GLU270OE130410[O], 1[N], 19[C],
GLU270CD23410[O], 1[N], 12[C],
GLU270CG1447[O], 1[N], 6[C],
PRO271CG443[N], 1[C],
PRO271CD241[C], 1[N],
ILE272CG21441[N], 7[O], 6[C],
ILE272CD1745[O], 2[C],
ILE272CG11047[O], 3[C],
HIS273CD21641[P], 6[C], 4[O], 5[N],
HIS273CG2741[P], 15[C], 5[O], 6[N],
HIS273NE21442[O], 5[N], 6[C], 1[P],
HIS273ND129414[C], 1[P], 7[N], 7[O],
HIS273CE11946[N], 3[O], 1[P], 9[C],
SER275OG25411[C], 2[P], 1[N], 11[O],
PRO277CG2042[P], 7[C], 10[O], 1[N],
PRO277CD3042[P], 12[C], 13[O], 3[N],
ASP278OD22247[O], 3[N], 10[C], 2[P],
ASP278OD12743[N], 11[O], 2[P], 11[C],
ASP278CG2243[N], 8[O], 2[P], 9[C],
ILE279CG11945[O], 5[N], 9[C],
ILE279CD11849[C], 5[N], 4[O],
ILE279CG21644[N], 3[O], 9[C],
ILE284CD1441[O], 2[N], 1[C],
ILE284CG1442[N], 2[C],
ASN286CG844[C], 4[N],
ASN286OD1643[N], 3[C],
ASN286ND2743[N], 4[C],
PRO287CG242[N],
PRO287CD442[N], 2[C],
ILE288CG1141[N],
SER289OG744[C], 3[N],
ASP327OD21246[C], 1[O], 5[N],
ASP327CG1245[N], 1[O], 6[C],
ASP327OD11045[C], 5[N],
THR334OG1242[N],
MET337CE141[N],
Total = 131



Download csv file of statistical distribution of contacts