@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1202: (2018-01-07 )
MIGGKNMDKDYILKVKGLYHQFLLGNNKTLQVLKNVSLSASRGEFISILGISGSGKSTLLKCISSLLEPTSGEVILNGINPYKIRNAKLSSIRRNEVSFIFQAYNLIPSLPVIENIALPLRLSQKKLTIKNVENLLKRMKFNAGLNDFVGTLSGGEQQKVAIARAVIADSDIIFADEPTGALDSVSREVIFELLRELVGAGKCVIMVTHDIELASKTDRALILKDGKIFKELHRPSGEELYKILEVQSTTEE

Atome Classification :

(47 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_J_5(4YMU)
?
[Raw transfer]




ATP_F_6(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_A_6(4YMV)
?
[Raw transfer]




ATP_J_5(4YMV)
?
[Raw transfer]




ATP_E_5(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_G_7(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ATP_E_5(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ATP_H_8(2FGK)

[Raw transfer]




ATP_H_8(2FGJ)

[Raw transfer]




ANP_J_5(3C41)
?
[Raw transfer]




ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




ACP_A_4(5X40)
CBIO_RHOCB
[Raw transfer]




ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_A_9(1XEF)
HLYBP_ECOLX
[Raw transfer]




128_A_2(2PMK)

[Raw transfer]




ADP_B_2(2FFA)

[Raw transfer]




ACP_B_6(5X40)
CBIO_RHOCB
[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




ADP_A_3(1F3O)
Y796_METJA
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




12D_A_2(3B5J)

[Raw transfer]




ADP_B_2(2FF7)

[Raw transfer]




ADP_C_11(4HLU)
ECFA1_THEMA
[Raw transfer]




ADP_B_6(2OLJ)
?
[Raw transfer]




ADP_D_7(4HLU)
ECFA1_THEMA
[Raw transfer]




ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




AT4_C_7(2OLK)
?
[Raw transfer]




AT4_A_5(2OLK)
?
[Raw transfer]




7 PsiBlast_PDB 80.7935% 0 - C- -5NIL - ? -
6 PsiBlast_PDB 80.7935% 0 - C- -5NIK - ? -
148 Fugue 75.0630% -46 - C1 -3TUZ - METN_ECOLI -
5 PsiBlast_PDB 74.7342% -23 - C1 -2PCL - LOLD_AQUAE -
25 PsiBlast_CBE 73.1639% -35 - C1 -4YMU 5.8 ?
4 PsiBlast_PDB 73.1442% -25 - C1 -2PCJ - LOLD_AQUAE -
21 PsiBlast_CBE 73.0441% -33 - C1 -1L2T - Y796_METJA -
3 PsiBlast_PDB 71.7142% -18 - C1 -1F3O 7.2 Y796_METJA
24 PsiBlast_CBE 71.6039% -29 - C1 -4YMV 4.7 ?
63 PsiBlast_CBE 71.1833% -64 - C1 -5X40 7.2 CBIO_RHOCB
10 PsiBlast_PDB 71.1039% -29 - C1 -4YMU 6.1 ?
22 PsiBlast_CBE 71.0940% -36 - C1 -3TIF 6.1 Y796_METJA
11 PsiBlast_PDB 70.9139% -26 - C1 -4YMV 4.8 ?
62 PsiBlast_CBE 70.9033% -65 * C1 *5X40 6.9 CBIO_RHOCB
8 PsiBlast_PDB 70.5039% -29 - C1 -4YMS - ? -
1 PsiBlast_PDB 69.8941% -27 - C1 -1L2T - Y796_METJA -
9 PsiBlast_PDB 69.4039% -28 - C1 -4YMT - ? -
12 PsiBlast_PDB 69.1039% -30 - C1 -4YMW - ? -
14 PsiBlast_PDB 68.9735% -47 - C1 -4U02 - ? -
2 PsiBlast_PDB 68.8140% -35 - C1 -3TIF - Y796_METJA -
13 PsiBlast_PDB 66.3135% -48 - C1 -4U00 6.1 ?
75 PsiBlast_CBE 63.4334% -16 - C1 -3FVQ 5.9 FBPC_NEIG1
44 PsiBlast_CBE 62.1835% -56 - C1 -2OLK 4.6 ?
47 PsiBlast_CBE 62.1135% -59 - C1 -2OLJ 4.0 ?
46 PsiBlast_CBE 61.3135% -57 - C1 -2OLK 4.4 ?
35 PsiBlast_CBE 61.1034% -49 - C1 -3C41 4.2 ?
39 PsiBlast_CBE 60.9335% -55 - C1 -2Q0H 3.6 ?
76 PsiBlast_CBE 60.9034% -16 - C1 -3FVQ 5.0 FBPC_NEIG1
19 PsiBlast_PDB 59.9935% -57 - C1 -2OLJ 4.7 ?
37 PsiBlast_CBE 59.4935% -53 - C1 -3C4J 5.1 ?
36 PsiBlast_CBE 58.8335% -50 - C1 -3C4J 3.8 ?
65 PsiBlast_CBE 58.1536% -46 - C1 -1B0U 4.3 HISP_SALTY
20 PsiBlast_PDB 57.9835% -56 - C1 -2OLK 4.9 ?
45 PsiBlast_CBE 56.9135% -56 - C1 -2OLK 5.1 ?
106 PsiBlast_CBE 56.7532% -40 - C1 -2FFA 4.9
18 PsiBlast_PDB 56.7534% -47 - C1 -3C41 5.2 ?
110 PsiBlast_CBE 55.8032% -45 - C1 -1XEF 4.8 HLYBP_ECOLX
105 PsiBlast_CBE 55.5132% -37 - C1 -2FGJ 5.4 HLYBP_ECOLX
67 PsiBlast_CBE 53.9032% -45 - C1 -2FF7 5.0
66 PsiBlast_CBE 53.6932% -45 - C1 -2PMK 5.2
71 PsiBlast_CBE 52.2232% -36 - C1 -2FGK 5.2 HLYBP_ECOLX
72 PsiBlast_CBE 52.0932% -42 - C1 -2FGK 5.5 HLYBP_ECOLX
102 PsiBlast_CBE 51.8932% -35 - C1 -2FGJ 5.1
73 PsiBlast_CBE 51.4832% -40 - C1 -2FGK 5.8 HLYBP_ECOLX
70 PsiBlast_CBE 51.3532% -43 - C1 -2FGK 5.5
118 PsiBlast_CBE 43.4132% -31 - C1 -4HLU 3.8 ECFA1_THEMA
119 PsiBlast_CBE 42.5632% -32 - C1 -4HLU 4.4 ECFA1_THEMA