@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1215: (2018-01-07 )
MKSMHPNMERRTRMKRQTVNQTLKRLAVDLASHPFLLFLAFLGTIAQVGLSIYLPILIGQVIDQVLVAGSSPVFWQIFLQMLLVVIGNTLVQWANPLLYNRLIFSYTRDLRERIIHKLHRLPIAFVDRQGSGEMVSRVTTDIEQLAAGLTMIFNQFFIGVLMILVSILAMLQIHLLMTLLVLLLTPLSMVISRFIAKKSYHLFQKQTETRGIQTQLIEESLSQQTIIQSFNAQTEFIQRLREAHDNYSGYSQSAIFYSSTVNPSTRFVNALIYALLAGVGAYRIMMGSALTVGRLVTFLNYVQQYTKPFNDISSVLAELQSALACVERIYGVLDSPEVAETGKEVLTTSDQVKGAISFKHVSFGYHPEKILIKDLSIDIPAGSKVAIVGPTGAGKSTLINLLMRFYPISSGDILLDGQSIYDYTRVSLRQQFGMVLQETWLTQGTIHDNIAFGNPEASREQVIAAAKAANADFFIQQLPQGYDTKLENAGESLSVGQAQLLTIARVFLAIPKILILDEATSSIDTRTEVLVQDAFAKLMKGRTSFIIAHRLSTIQDADLILVLVDGDIVEYGNHQELMDRKGKYYQMQKAAAFSSE

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

12D_A_2(3B5J)

[Raw transfer]




ACP_A_4(4AYT)
ABCBA_HUMAN
[Raw transfer]




ATP_A_9(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_A_2(3NH9)

[Raw transfer]




128_A_2(2PMK)

[Raw transfer]




ACP_A_4(4AYX)
ABCBA_HUMAN
[Raw transfer]




AGS_A_3(4S0F)
?
[Raw transfer]




AGS_B_4(4S0F)
?
[Raw transfer]




ANP_D_7(3B5Y)
MSBA_SALTY
[Raw transfer]




ANP_A_6(3B5Y)
MSBA_SALTY
[Raw transfer]




ANP_B_5(3B5Y)
MSBA_SALTY
[Raw transfer]




ANP_C_8(3B5Y)
MSBA_SALTY
[Raw transfer]




ADP_A_5(3B5Z)
MSBA_SALTY
[Raw transfer]




ADP_C_7(3B5Z)
MSBA_SALTY
[Raw transfer]




115 HHSearch 92.0638%-154 - C2 -3QF4 - Y288_THEMA -
116 HHSearch 85.0238% - - C2 -4Q4H - Y288_THEMA -
3 PsiBlast_PDB 82.9838% - - C2 -4Q4H - Y288_THEMA -
1 PsiBlast_PDB 81.8838% -71 - C2 -3QF4 - Y288_THEMA -
4 PsiBlast_PDB 80.4738% -71 - C2 -4Q4J - Y288_THEMA -
2 PsiBlast_PDB 80.2438% -72 - C2 -4Q4A - Y288_THEMA -
28 PsiBlast_CBE 74.5231% - - C2 -3B5Z - MSBA_SALTY -
27 PsiBlast_CBE 74.5131% - - C2 -3B5Z 2.3 MSBA_SALTY
26 PsiBlast_CBE 74.5131% - - C2 -3B5Z - MSBA_SALTY -
9 PsiBlast_PDB 74.5131% - - C2 -3B5Z 2.3 MSBA_SALTY
30 PsiBlast_CBE 74.4831% - - C2 -3B5Y 1.9 MSBA_SALTY
31 PsiBlast_CBE 74.4731% - - C2 -3B5Y 1.9 MSBA_SALTY
29 PsiBlast_CBE 74.4731% - - C2 -3B5Y 1.9 MSBA_SALTY
8 PsiBlast_PDB 74.4731% - - C2 -3B5Y 2.1 MSBA_SALTY
123 HHSearch 73.3432% -60 - C2 -5MKK - ? -
110 HHSearch 72.1929% - - C2 -3B5X - MSBA_VIBCH -
120 HHSearch 71.4327% - - C2 -4Q4H - ? -
98 Fugue 71.2730% -66 - C2 -3B60 - MSBA_SALTY -
106 HHSearch 70.8230% -67 - C2 -3B60 - MSBA_SALTY -
35 PsiBlast_CBE 70.7631% -81 * C2 *3WMG - ? -