@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1229: (2018-01-07 )
MKLKTNIRHLHGSIRVPGDKSISHRSIIFGSLAEGETKVYDILRGEDVLSTMQVFRDLGVEIEDKDGVITIQGVGMAGLKAPQNALNMGNSGTSIRLISGVLAGADFEVEMFGDDSLSKRPMDRVTLPLKKMGVSISGQTERDLPPLRLKGTKNLRPIHYELPIASAQVKSALMFAALQAKGESVIIEKECTRNHTEDMLKQFGGHLSVDGKKITVQGPQKLTGQKVVVPGDISSAAFWLVAGLINPNSHLVLQNVGINETRTGIIDVIRAMGGKLEVTEIDPVAKSSTLTVESSDLKGTEIGGALIPRLIDELPIIALLATQAQGVTVIKDAEELKVKETDRIQVVADALNSMGADITPTADGMIIKGKSALHGARVNTFGDHRIGMMTAIAALLVADGEVELDRAEAINTSYPSFFDDLESLIHG

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GG9_A_2(2PQB)
AROA_AGRSC
[Raw transfer]



GG9_A_2(2PQD)
AROA_AGRSC
[Raw transfer]



GG9_A_2(2PQB)
AROA_AGRSC
[Raw transfer]



RC1_A_2(2PQC)
AROA_AGRSC
[Raw transfer]



RC1_A_2(2PQC)
AROA_AGRSC
[Raw transfer]



S3P_A_4(2GG6)
AROA_AGRSC
[Raw transfer]



S3P_A_2(2GGA)
AROA_AGRSC
[Raw transfer]



S3P_A_2(4ZND)
AROA_COXBU
[Raw transfer]



S3P_A_2(2GGD)
AROA_AGRSC
[Raw transfer]



GPJ_A_3(2GGD)
AROA_AGRSC
[Raw transfer]



GPJ_A_3(2GGA)
AROA_AGRSC
[Raw transfer]
2 PsiBlast_PDB 97.3297%-106 - C7 -1RF5 - AROA_STRPN -
3 PsiBlast_PDB 95.6597% -96 - C7 -1RF6 - AROA_STRPN -
23 PsiBlast_CBE 95.4897% -95 - C7 -1RF6 - AROA_STRPN -
4 PsiBlast_PDB 95.1092%-107 - C7 -4N3P - ? -
21 PsiBlast_CBE 94.7697% -95 - C7 -1RF6 - AROA_STRPN -
22 PsiBlast_CBE 94.4297% -94 - C7 -1RF6 - AROA_STRPN -
1 PsiBlast_PDB 94.3297% -93 - C7 -1RF4 - AROA_STRPN -
25 PsiBlast_CBE 94.3097% -94 - C7 -1RF4 - AROA_STRPN -
24 PsiBlast_CBE 94.2997% -95 - C7 -1RF4 - AROA_STRPN -
26 PsiBlast_CBE 94.1897% -94 - C7 -1RF4 - AROA_STRPN -
49 HHSearch 92.8597% -84 - C7 -1RF6 - AROA_STRPN -
54 HHSearch 66.0543% -11 - C7 -3SLH - AROA_COXBU -
53 HHSearch 65.7143% -9 * C7 *3SLH - AROA_COXBU -
8 PsiBlast_PDB 65.3543% -12 - C7 -3ROI - AROA_COXBU -
58 HHSearch 63.6046% 1 - C7 -5BUF - ? -
11 PsiBlast_PDB 63.5343% -5 - C7 -4ZND 4.3 AROA_COXBU
12 PsiBlast_PDB 63.2642% -10 - C7 -3TR1 - AROA_COXBU -
36 PsiBlast_CBE 63.2043% -5 - C7 -3SLH - AROA_COXBU -
38 PsiBlast_CBE 63.1643% -6 - C7 -3SLH - AROA_COXBU -
37 PsiBlast_CBE 63.1143% -4 - C7 -3SLH - AROA_COXBU -
14 PsiBlast_PDB 61.9043% -24 - C7 -2PQD 9.0 AROA_AGRSC
19 PsiBlast_PDB 61.3742% -24 - C7 -2GGA 5.1 AROA_AGRSC
16 PsiBlast_PDB 61.3142% -26 - C7 -2PQC 6.9 AROA_AGRSC
13 PsiBlast_PDB 61.3143% -22 - C7 -2GGD 5.0 AROA_AGRSC
15 PsiBlast_PDB 60.9942% -23 - C7 -2PQB 9.5 AROA_AGRSC
18 PsiBlast_PDB 60.7942% -23 - C7 -2GG6 4.5 AROA_AGRSC
51 HHSearch 58.0642% 11 - C7 -2PQB 9.5 AROA_AGRSC
52 HHSearch 57.7942% 12 - C7 -2PQC 6.9 AROA_AGRSC