@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1246: (2018-01-08 )
MKKPIIEFKNVSKVFEDSNTKVLKDINFELEEGKFYTLLGASGSGKSTILNIIAGLLDATTGDIMLDGVRINDIPTNKRDVHTVFQSYALFPHMNVFENVAFPLRLRKIDKKEIEQRVAEVLKMVQLEGYEKRSIRKLSGGQRQRVAIARAIINQPRVVLLDEPLSALDLKLRTDMQYELRELQQRLGITFVFVTHDQEEALAMSDWIFVMNDGEIVQSGTPVDIYDEPINHFVATFIGESNILPGTMIEDYLVEFNGKRFEAVDGGMKPNEPVEVVIRPEDLRITLPEEGKLQVKVDTQLFRGVHYEIIAYDELGNEWMIHSTRKAIVGEEIGLDFEPEDIHIMRLNETEEEFDARIEEYVEIEEQEAGLINAIEEERDEENKL

Atome Classification :

(47 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




ANP_J_5(3C41)
?
[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_J_5(4YMU)
?
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ATP_A_6(4YMV)
?
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




ATP_C_3(1VCI)
?
[Raw transfer]




POP_A_9(2D62)
?
[Raw transfer]




ADP_B_6(2OLJ)
?
[Raw transfer]




POP_A_9(2D62)
?
[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




AT4_C_7(2OLK)
?
[Raw transfer]




ANP_A_6(3B5Y)
MSBA_SALTY
[Raw transfer]




ANP_D_7(3B5Y)
MSBA_SALTY
[Raw transfer]




ANP_C_8(3B5Y)
MSBA_SALTY
[Raw transfer]




ADP_A_5(3B5Z)
MSBA_SALTY
[Raw transfer]




ADP_C_7(3B5Z)
MSBA_SALTY
[Raw transfer]




LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]




LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]




EDO_A_13(2PCL)
LOLD_AQUAE
[Raw transfer]




IPA_A_6(3TIF)
Y796_METJA
[Raw transfer]




131 Fugue 83.4937%-112 - C2 -1Z47 - ? -
19 PsiBlast_PDB 80.1938%-104 - C2 -3PUV - MALK_ECOLI -
2 PsiBlast_PDB 80.0040%-123 - C2 -1Z47 - ? -
16 PsiBlast_PDB 79.4438%-101 - C2 -3PUY - MALK_ECOLI -
20 PsiBlast_PDB 79.3138% -99 - C2 -3PUW - MALK_ECOLI -
27 PsiBlast_CBE 79.1538%-103 - C2 -3PUZ - MALK_ECOLI -
28 PsiBlast_CBE 79.1138% -96 - C2 -3PUX - MALK_ECOLI -
139 HHSearch 79.0238% -94 - C2 -4TQU - ? -
24 PsiBlast_CBE 78.9938% -97 - C2 -4KI0 - MALK_ECOLI -
26 PsiBlast_CBE 78.9438%-100 - C2 -3RLF - MALK_ECOLI -
38 PsiBlast_CBE 78.7238% -95 - C2 -2R6G - MALK_ECOLI (first) -
8 PsiBlast_PDB 78.6240%-125 - C2 -4XTC - ? -
146 HHSearch 78.4237%-105 - C2 -1Z47 - ? -
144 HHSearch 78.2838%-106 - C2 -1Z47 - ? -
25 PsiBlast_CBE 78.0738% -98 - C2 -3RLF - MALK_ECOLI -
33 PsiBlast_CBE 77.9838% -98 - C2 -2AWN - MALK_ECOLI -
17 PsiBlast_PDB 77.7738% -99 - C2 -3PUZ - MALK_ECOLI -
37 PsiBlast_CBE 77.5138% -99 - C2 -2R6G - MALK_ECOLI (first) -
23 PsiBlast_CBE 77.5138% -96 - C2 -4KI0 - MALK_ECOLI -
31 PsiBlast_CBE 76.6738% -95 - C2 -2AWO - MALK_ECOLI -
147 HHSearch 73.6842% 11 - C2 -2D62 3.0 ?
3 PsiBlast_PDB 71.5040% 2 - C2 -2D62 3.0 ?
9 PsiBlast_PDB 67.5946%-131 - C2 -1VCI 3.9 ?
138 HHSearch 59.2930% -13 - C2 -3FVQ 7.5 FBPC_NEIG1
58 PsiBlast_CBE 58.6035% -11 - C2 -3FVQ 7.5 FBPC_NEIG1
59 PsiBlast_CBE 57.3235% -15 - C2 -3FVQ 7.0 FBPC_NEIG1
81 PsiBlast_CBE 48.1235% -19 - C2 -2OLK 6.0 ?
80 PsiBlast_CBE 47.1835% -15 - C2 -2OLK 6.0 ?
73 PsiBlast_CBE 46.6135% -17 - C2 -3C4J 6.8 ?
86 PsiBlast_CBE 45.8935% -15 - C2 -3C41 5.8 ?
82 PsiBlast_CBE 45.4335% -15 - C2 -2OLK 6.0 ?
84 PsiBlast_CBE 45.1135% -13 - C2 -2OLJ 5.8 ?
75 PsiBlast_CBE 44.7235% -15 - C2 -2Q0H 5.6 ?
87 PsiBlast_CBE 43.8935% -16 - C2 -3C41 6.2 ?
72 PsiBlast_CBE 43.7835% -13 - C2 -3C4J 5.2 ?
90 PsiBlast_CBE 39.1737% 14 - C2 -3TIF 2.8 Y796_METJA
56 PsiBlast_CBE 37.5537% 47 - C2 -4YMU 5.1 ?
57 PsiBlast_CBE 37.0937% 48 - C2 -4YMU 4.6 ?
55 PsiBlast_CBE 36.2137% 50 - C2 -4YMV 3.8 ?
92 PsiBlast_CBE 35.4333% 34 - C2 -4MKI 2.0 ECFA2_CALS4
93 PsiBlast_CBE 34.2333% 38 - C2 -4MKI 1.9 ECFA2_CALS4
103 PsiBlast_CBE 33.3035% -4 - C2 -2PCL 2.2 LOLD_AQUAE
129 PsiBlast_CBE 18.9133% - - C2 -3B5Y 1.9 MSBA_SALTY
128 PsiBlast_CBE 18.8833% - - C2 -3B5Y 1.9 MSBA_SALTY
127 PsiBlast_CBE 18.8833% - - C2 -3B5Y 1.9 MSBA_SALTY
126 PsiBlast_CBE 18.8533% - - C2 -3B5Z 2.3 MSBA_SALTY
124 PsiBlast_CBE 18.8533% - - C2 -3B5Z 2.3 MSBA_SALTY