@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1254: (2018-01-08 )
MSTYNWDEKHILTFPEEKVALSTKDVHVYYGKNESIKGIDMQFERNKITALIGPSGSGKSTYLRSLNRMNDTIDIAKVTGQILYRGIDVNRPEINVYEMRKHIGMVFQRPNPFAKSIYRNITFAHERAGVKDKQVLDEIVETSLRQAALWDQVKDDLHKSALTLSGGQQQRLCIARAISVKPDILLMDEPASALDPIATMQLEETMFELKKDFTIIIVTHNMQQAARASDYTGFFYLGDLIEYDKTATIFQNAKLQSTNDYVSGHFG

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_J_5(4YMU)
?
[Raw transfer]



ATP_A_6(4YMV)
?
[Raw transfer]



ATP_A_7(4YMU)
?
[Raw transfer]



ANP_J_5(3C41)
?
[Raw transfer]



AGS_B_6(3C4J)
?
[Raw transfer]



AGS_A_4(3C4J)
?
[Raw transfer]



ADP_A_5(2Q0H)
?
[Raw transfer]



AT4_D_8(2OLK)
?
[Raw transfer]



ADP_A_5(2OLJ)
?
[Raw transfer]



AT4_C_7(2OLK)
?
[Raw transfer]



AT4_B_6(2OLK)
?
[Raw transfer]



ANP_K_6(3C41)
?
[Raw transfer]



ACP_A_4(4AYT)
ABCBA_HUMAN
[Raw transfer]



ADP_B_6(2OLJ)
?
[Raw transfer]



LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]
12 PsiBlast_PDB 80.9931% -48 - C1 -4U00 - ? -
24 PsiBlast_CBE 79.7234% 18 - C1 -3C4J 4.6 ?
13 PsiBlast_PDB 79.0331% -46 - C1 -4U02 - ? -
11 PsiBlast_PDB 78.8034% 20 - C1 -3C4J 6.7 ?
7 PsiBlast_PDB 78.6434% 17 - C1 -2OLJ 6.1 ?
21 PsiBlast_CBE 78.0934% -45 - C1 -4YMV 5.4 ?
5 PsiBlast_PDB 78.0034% -48 - C1 -4YMW - ? -
22 PsiBlast_CBE 77.8034% -43 - C1 -4YMU 5.9 ?
4 PsiBlast_PDB 77.5834% -44 - C1 -4YMV - ? -
2 PsiBlast_PDB 77.5634% -43 - C1 -4YMT - ? -
31 PsiBlast_CBE 76.8634% 17 - C1 -2OLK 6.4 ?
3 PsiBlast_PDB 76.6734% -45 - C1 -4YMU 5.1 ?
1 PsiBlast_PDB 76.0434% -44 - C1 -4YMS - ? -
29 PsiBlast_CBE 75.9234% 18 - C1 -2OLK 6.1 ?
23 PsiBlast_CBE 75.4534% 14 - C1 -3C41 5.9 ?
16 PsiBlast_PDB 75.3129% -25 - C1 -3TUZ - METN_ECOLI -
9 PsiBlast_PDB 75.2434% 18 - C1 -2OUK - ? -
68 Fugue 74.9128% -23 - C1 -3TUZ - METN_ECOLI -
6 PsiBlast_PDB 74.7734% 16 - C1 -3C41 7.0 ?
8 PsiBlast_PDB 74.7334% 16 - C1 -2OLK - ? -
10 PsiBlast_PDB 74.2634% 15 - C1 -2Q0H 5.5 ?
32 PsiBlast_CBE 73.4334% 20 - C1 -2OLJ 5.8 ?
30 PsiBlast_CBE 72.7934% 18 - C1 -2OLK 6.5 ?