@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1289: (2018-01-09 )
MLMKIYKKLFAYVQDKKYLGVLAIIFSAISALLTVYGYYLIYKFLDKLIINSNLSGAESIALKSVITLTSGAIFYFVSGMFSHILGFRLETNLRKRGIDGLEKASFRFFDLNPSGQIRKIIDDNAAQTHQVVAHMIPDSSQAIITPVLVLALGFIVSIRVGIILLALTIIGGLILGAMMGEQEFMKIYQESLSKLSAETVEYVRGMQVVKIFKANVESFKSFYKAIKDYSKYAYDYSLSCKRPYVLYQWLFFGLIAILIIPIVYFMTSLASAKVILLELIMILFLSGVLFVSFMRMMWYSMYISQGNYAVDTLEALYEDMQKDKLVHGNINNFKNYNIEFENVSFAYNDKAVIENLSFNLEEGKSYALVGSSGSGKSTVAKLISGFYNVNKGSIKIGGIAISEYSDEALIKAISFVFQDSKLFKKSIYDNVALANKDATKDDVMRALKLAGCDLILDKFPERENTIIGSKGVYLSGGEKQRIAIARAILKDSKIIIMDEASASIDPDNEFELQKAFKNLMKDKTVIMIAHRLSTIKDLDEIIVMDSGKIIERGSDKELMSKDIRYKSLQEMFNSANEWRVSNERVL

Atome Classification :

(43 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_H_8(2FGK)

[Raw transfer]



ATP_F_6(2FGK)
HLYBP_ECOLX
[Raw transfer]



ATP_E_5(2FGK)
HLYBP_ECOLX
[Raw transfer]



ATP_E_5(2FGJ)
HLYBP_ECOLX
[Raw transfer]



ACP_A_4(4AYT)
ABCBA_HUMAN
[Raw transfer]



ANP_A_3(4PL0)
MCJD_ECOLX
[Raw transfer]



AGS_A_3(4S0F)
?
[Raw transfer]



ATP_G_7(2FGK)
HLYBP_ECOLX
[Raw transfer]



ACP_A_4(4AYX)
ABCBA_HUMAN
[Raw transfer]



128_A_2(2PMK)

[Raw transfer]



ANP_A_3(5EG1)
MCJD_ECOLX
[Raw transfer]



ATP_A_9(1XEF)
HLYBP_ECOLX
[Raw transfer]



ATP_H_8(2FGJ)

[Raw transfer]



ATP_G_7(2FGJ)
HLYBP_ECOLX
[Raw transfer]



ANP_B_5(5EG1)
MCJD_ECOLX
[Raw transfer]



ANP_A_2(4AYW)
ABCBA_HUMAN
[Raw transfer]



12D_A_2(3B5J)

[Raw transfer]



ANP_B_6(4PL0)
MCJD_ECOLX
[Raw transfer]



AGS_B_4(4S0F)
?
[Raw transfer]



ANP_D_7(3B5Y)
MSBA_SALTY
[Raw transfer]



ANP_A_6(3B5Y)
MSBA_SALTY
[Raw transfer]



ANP_B_5(3B5Y)
MSBA_SALTY
[Raw transfer]



ANP_C_8(3B5Y)
MSBA_SALTY
[Raw transfer]



ADP_B_6(3B5Z)
MSBA_SALTY
[Raw transfer]



ADP_D_8(3B5Z)
MSBA_SALTY
[Raw transfer]



ADP_C_7(3B5Z)
MSBA_SALTY
[Raw transfer]



ADP_A_5(3B5Z)
MSBA_SALTY
[Raw transfer]
9 PsiBlast_PDB 81.5127% - - C1 -3B5X - MSBA_VIBCH -
79 HHSearch 77.0925% - - C1 -3B5X - MSBA_VIBCH -
6 PsiBlast_PDB 75.2728% - - C1 -4Q4H - Y288_THEMA -
84 HHSearch 73.7325% - - C1 -4Q4H - Y288_THEMA -
2 PsiBlast_PDB 69.1828% -15 - C1 -4AYX 5.9 ABCBA_HUMAN
3 PsiBlast_PDB 69.0128% -17 - C1 -3ZDQ - ABCBA_HUMAN -
1 PsiBlast_PDB 67.9628% -15 * C1 *4AYT 6.1 ABCBA_HUMAN
8 PsiBlast_PDB 65.9428% -27 - C1 -4AYW 5.5 ABCBA_HUMAN
4 PsiBlast_PDB 65.8928% -12 - C1 -3QF4 - Y288_THEMA -
85 HHSearch 65.4125% -22 - C1 -3QF4 - Y288_THEMA -
7 PsiBlast_PDB 65.1828% -13 - C1 -4Q4J - Y288_THEMA -
5 PsiBlast_PDB 63.9828% -9 - C1 -4Q4A - Y288_THEMA -
95 Fugue 63.5625% -27 - C1 -3B60 - MSBA_SALTY -
81 HHSearch 63.3227% -7 - C1 -4A82 - Y1866_STAAM -
88 HHSearch 62.1424% -27 - C1 -4MRP - ATM1_NOVAD -
87 HHSearch 61.6624% -25 - C1 -4MRS - ATM1_NOVAD -
86 HHSearch 61.1120% - - C1 -4Q4H - ? -
77 HHSearch 60.5926% -7 - C1 -4AYX - ABCBA_HUMAN -
74 HHSearch 60.2125% -10 - C1 -3B60 - MSBA_SALTY -
78 HHSearch 60.0826% -8 - C1 -4AYT - ABCBA_HUMAN -
49 PsiBlast_CBE 37.2640% -1 - C1 -2FGJ 6.8 HLYBP_ECOLX
51 PsiBlast_CBE 36.2940% 9 - C1 -2FGJ 6.9 HLYBP_ECOLX
56 PsiBlast_CBE 35.6740% 7 - C1 -1XEF 6.2 HLYBP_ECOLX
41 PsiBlast_CBE 35.5240% 2 - C1 -2FGK 7.2
29 PsiBlast_CBE 35.2035% - - C1 -3B5Z 2.3 MSBA_SALTY
28 PsiBlast_CBE 35.2035% - - C1 -3B5Z 2.5 MSBA_SALTY
30 PsiBlast_CBE 35.1935% - - C1 -3B5Z 2.9 MSBA_SALTY
13 PsiBlast_PDB 35.1935% - - C1 -3B5Z 2.3 MSBA_SALTY
33 PsiBlast_CBE 35.0535% - - C1 -3B5Y 1.9 MSBA_SALTY
31 PsiBlast_CBE 35.0435% - - C1 -3B5Y 1.9 MSBA_SALTY
12 PsiBlast_PDB 35.0435% - - C1 -3B5Y 2.1 MSBA_SALTY
32 PsiBlast_CBE 35.0335% - - C1 -3B5Y 1.9 MSBA_SALTY
43 PsiBlast_CBE 35.0240% 2 - C1 -2FGK 7.2 HLYBP_ECOLX
69 PsiBlast_CBE 34.8636% -11 - C1 -5EG1 6.2 MCJD_ECOLX
68 PsiBlast_CBE 34.5836% -18 - C1 -5EG1 6.3 MCJD_ECOLX
71 PsiBlast_CBE 33.7536% -12 - C1 -4PL0 6.5 MCJD_ECOLX
70 PsiBlast_CBE 33.7036% -16 - C1 -4PL0 6.2 MCJD_ECOLX
44 PsiBlast_CBE 33.6740% 3 - C1 -2FGK 7.5 HLYBP_ECOLX
48 PsiBlast_CBE 32.8440% 14 - C1 -2FGJ 6.8
47 PsiBlast_CBE 31.5640% 6 - C1 -4S0F 4.1 ?
42 PsiBlast_CBE 30.9440% 7 - C1 -2FGK 6.8 HLYBP_ECOLX
37 PsiBlast_CBE 30.0141% 10 - C1 -2PMK 7.1
46 PsiBlast_CBE 28.7140% 9 - C1 -4S0F 2.3 ?