@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1310: (2018-01-09 )
MSAIERITKAAHLIDMNDIIREGNPTLRTVAEEVTFPLSDQEIILGEKMMQFLKHSQDPVMAEKMGLRGGVGLAAPQLDISKRIIAVLVPNIVEEGETPQEAYDLEAIMYNPKIVSHSVQDAALGEGEGCLSVDRNVPGYVVRHARVTVDYFDKDGEKHRIKLKGYNSIVVQHEIDHINGIMFYDRINEKDPFAVKDGLLILE

Atome Classification :

(41 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BB2_A_2(5JF1)
DEF_STRA3
[Raw transfer]




SF5_A_2(5JF3)
DEF_STRA3
[Raw transfer]




6JT_A_2(5JF4)
DEF_STRA3
[Raw transfer]




7JT_A_2(5JF5)
DEF_STRA3
[Raw transfer]




SF7_A_2(5JF2)
DEF_STRA3
[Raw transfer]




PN3_A_2(5JF8)
DEF_STRA3
[Raw transfer]




BB2_A_6(2OS1)
DEF_ENTFA
[Raw transfer]




SB8_A_4(2AIA)
DEF_STRR6
[Raw transfer]




BB2_A_3(2OS3)
DEF_STRP1
[Raw transfer]




BB2_A_4(1LQY)
DEF2_GEOSE
[Raw transfer]




BB2_A_3(2OS3)
DEF_STRP1
[Raw transfer]




BB2_A_4(1LQY)
DEF2_GEOSE
[Raw transfer]




SB7_A_4(2AI7)
DEF_STRR6
[Raw transfer]




BB2_B_7(2OKL)
DEF2_BACCR
[Raw transfer]




BB2_B_7(2OKL)
DEF2_BACCR
[Raw transfer]




5LI_P_4(3SW8)
?
[Raw transfer]




BB2_D_12(4WXL)
DEF_HAEI8
[Raw transfer]




SB9_P_4(2AIE)
DEF_STRR6
[Raw transfer]




EPE_B_6(1VEY)
DEF_LEPIN
[Raw transfer]




BB2_A_6(4WXL)
DEF_HAEI8
[Raw transfer]




FMT_A_13(1Y6H)
DEF_LEPIN
[Raw transfer]




FMT_A_8(1VEV)
DEF_LEPIN
[Raw transfer]




BB2_A_5(2OKL)
DEF2_BACCR
[Raw transfer]




BB4_A_2(5JF6)
DEF_STRA3
[Raw transfer]




FMT_B_18(1VEZ)
DEF_LEPIN
[Raw transfer]




6JU_A_2(5JF7)
DEF_STRA3
[Raw transfer]




FMT_A_12(1VEZ)
DEF_LEPIN
[Raw transfer]




BRR_B_7(1RL4)
?
[Raw transfer]




GOL_D_12(4WXK)
DEF_HAEI8
[Raw transfer]




EPE_A_5(1VEY)
DEF_LEPIN
[Raw transfer]




MES_B_6(1VEV)
DEF_LEPIN
[Raw transfer]




GOL_B_8(4WXK)
DEF_HAEI8
[Raw transfer]




MES_A_5(1VEV)
DEF_LEPIN
[Raw transfer]




GLY_B_5(1Y6H)
DEF_LEPIN
[Raw transfer]




DTT_A_5(1SV2)
DEF_LEPIN
[Raw transfer]




DTT_B_6(1SV2)
DEF_LEPIN
[Raw transfer]




1 PsiBlast_PDB 93.77100%-112 - C6 -3SW8 5.2 ?
4 PsiBlast_PDB 93.6998%-113 - C6 -2AIE 4.0 DEF_STRR6
2 PsiBlast_PDB 93.2998%-108 - C6 -2AI7 4.2 DEF_STRR6
3 PsiBlast_PDB 92.3098%-111 - C6 -2AIA 5.8 DEF_STRR6
12 PsiBlast_PDB 85.0582% -49 - C6 -5JF5 4.9 DEF_STRA3
5 PsiBlast_PDB 84.3582% -53 - C6 -5JEX - DEF_STRA3 -
9 PsiBlast_PDB 84.1682% -53 - C6 -5JF2 4.3 DEF_STRA3
10 PsiBlast_PDB 84.1282% -53 - C6 -5JF3 4.2 DEF_STRA3
11 PsiBlast_PDB 83.8582% -53 - C6 -5JF4 4.8 DEF_STRA3
8 PsiBlast_PDB 83.7682% -53 - C6 -5JF1 5.9 DEF_STRA3
7 PsiBlast_PDB 83.3982% -54 - C6 -5JEZ - DEF_STRA3 -
14 PsiBlast_PDB 83.3182% -53 - C6 -5JF7 4.3 DEF_STRA3
15 PsiBlast_PDB 83.2182% -52 - C6 -5JF8 3.6 DEF_STRA3
13 PsiBlast_PDB 83.0982% -49 - C6 -5JF6 4.6 DEF_STRA3
16 PsiBlast_PDB 83.0881% -49 - C6 -5JF0 - DEF_STRA3 -
6 PsiBlast_PDB 82.8882% -44 - C6 -5JEY - DEF_STRA3 -
19 PsiBlast_PDB 82.6468%-112 - C6 -3CMD - ? -
18 PsiBlast_PDB 82.5668%-114 - C6 -3G6N - ? -
17 PsiBlast_PDB 80.9274% -48 - C6 -2OS3 5.7 DEF_STRP1
20 PsiBlast_PDB 80.7068%-113 - C6 -2OS1 6.4 DEF_ENTFA
153 HHSearch 78.8573% -46 - C6 -2OS3 5.6 DEF_STRP1
25 PsiBlast_CBE 73.8650% -95 - C6 -2OKL 6.4 DEF2_BACCR
24 PsiBlast_CBE 73.8255% -90 - C6 -1LQY 6.6 DEF2_GEOSE
26 PsiBlast_CBE 71.3650% -89 - C6 -2OKL 6.1 DEF2_BACCR
167 HHSearch 68.9157% -46 - C6 -1LQY 6.6 DEF2_GEOSE
155 HHSearch 66.1952% -46 - C6 -2OKL 6.4 DEF2_BACCR
37 PsiBlast_CBE 65.2434% -80 - C6 -1VEY 3.5 DEF_LEPIN
42 PsiBlast_CBE 64.0734% -82 - C6 -1SV2 1.6 DEF_LEPIN
40 PsiBlast_CBE 63.7634% -80 - C6 -1VEV 3.0 DEF_LEPIN
39 PsiBlast_CBE 63.2534% -84 - C6 -1VEV 2.3 DEF_LEPIN
41 PsiBlast_CBE 63.1134% -83 - C6 -1SV2 2.4 DEF_LEPIN
34 PsiBlast_CBE 62.9334% -93 - C6 -1Y6H 3.4 DEF_LEPIN
38 PsiBlast_CBE 61.6934% -82 - C6 -1VEY 3.2 DEF_LEPIN
36 PsiBlast_CBE 61.6234% -79 - C6 -1VEZ 3.2 DEF_LEPIN
33 PsiBlast_CBE 61.1434% -79 * C6 *1Y6H 3.0 DEF_LEPIN
35 PsiBlast_CBE 60.6434% -79 - C6 -1VEZ 3.2 DEF_LEPIN
31 PsiBlast_CBE 58.4535% -91 - C6 -1RL4 4.3 ?
64 PsiBlast_CBE 50.7335% -51 - C6 -4WXL 5.5 DEF_HAEI8
68 PsiBlast_CBE 50.2235% -54 - C6 -4WXK 3.2 DEF_HAEI8
67 PsiBlast_CBE 49.2535% -47 - C6 -4WXL 5.8 DEF_HAEI8
70 PsiBlast_CBE 49.1635% -48 - C6 -4WXK 3.1 DEF_HAEI8