@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1323: (2018-01-09 )
MSKIVVVGANHAGTACINTMLDNFGNENEIVVFDQNSNISFLGCGMALWIGEQIDGAEGLFYSDKEKLEAKGAKVYMNSPVLSIDYDAKVVTAEVEGKEHKESYEKLIFATGSTPILPPIEGVEIVKGNREFKATLENVQFVKLYQNAEEVINKLSDKSQHLDRIAVVGGGYIGVELAEAFERLGKEVVLVDIVDTVLNGYYDKDFTQMMAKNLEDHNIRLALGQTVKAIEGDGKVERLITDKESFDVDMVILAVGFRPNTALADGKIELFRNGAFLVDKKQETSIPGVYAVGDCATVYDNARKDTSYIALASNAVRTGIVGAYNACGHELEGIGVQGSNGISIYGLHMVSTGLTLEKAKAAGYNATETGFNDLQKPEFMKHDNHEVAIKIVFDKDSREILGAQMVSHDIAISMGIHMFSLAIQEHVTIDKLALTDLFFLPHFNKPYNYITMAALTAEK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_B_3(2BC1)
NAOX_STRP6
[Raw transfer]



FAD_A_4(2BC1)
NAOX_STRP6
[Raw transfer]



FAD_E_5(2BCP)
NAOX_STRP6
[Raw transfer]



FAD_F_6(2BCP)
NAOX_STRP6
[Raw transfer]



NAD_D_4(2NPX)
NAPE_ENTFA
[Raw transfer]



CYO_B_2(2NPX)
NAPE_ENTFA
[Raw transfer]



CYO_B_2(1NPX)
NAPE_ENTFA
[Raw transfer]



CYO_C_3(1NHS)
NAPE_ENTFA
[Raw transfer]
22 PsiBlast_CBE 98.4075%-114 - C1 -2BC1 13.3 NAOX_STRP6
1 PsiBlast_PDB 97.8875%-111 - C1 -2BC1 13.1 NAOX_STRP6
21 PsiBlast_CBE 96.8675%-112 - C1 -2BCP 13.4 NAOX_STRP6
2 PsiBlast_PDB 95.8675%-113 - C1 -2BCP 13.3 NAOX_STRP6
35 HHSearch 70.8740% -28 * C1 *5ER0 - ? -
23 PsiBlast_CBE 70.2438% -28 - C1 -5ER0 - ? -
3 PsiBlast_PDB 69.1838% -25 - C1 -5ER0 - ? -
24 PsiBlast_CBE 69.0738% -25 - C1 -5ER0 - ? -
25 PsiBlast_CBE 69.0238% -26 - C1 -5ER0 - ? -
36 HHSearch 69.0026%-117 - C1 -3OC4 - ? -
17 PsiBlast_PDB 67.3126%-112 - C1 -3OC4 - ? -
37 HHSearch 66.4926%-113 - C1 -3OC4 - ? -
4 PsiBlast_PDB 64.5035% -19 - C1 -1NHR - NAPE_ENTFA -
8 PsiBlast_PDB 64.2735% -17 - C1 -1NPX 2.1 NAPE_ENTFA
5 PsiBlast_PDB 63.5735% -16 - C1 -1NHP - NAPE_ENTFA -
10 PsiBlast_PDB 63.5435% -19 - C1 -1NHS 2.0 NAPE_ENTFA
49 HHSearch 63.5036% -17 - C1 -1JOA - NAPE_ENTFA -
48 HHSearch 63.3536% -17 - C1 -1NHP - NAPE_ENTFA -
9 PsiBlast_PDB 63.1235% -15 - C1 -2NPX 5.8 NAPE_ENTFA
6 PsiBlast_PDB 62.7935% -16 - C1 -1NHQ - NAPE_ENTFA -