@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1336: (2018-01-10 )
MKTKLPTEWQELSDQLGFQEFTPIQTQLFEPLLAGENLLGVSQTGTGKTLAYLLPSLLRLQKKKAQQLLILAPNTELAGQIFDVCKTWAEAIGLTAQLFLSGSSQKRQIERLKKGPEILIGTPGRIFELIKLKKIKMMNVETIILDEFDQLLDDSQIHFVEKITHYAPRDHQLVYMSATTKFDQEKIVPNTRTIDLSDQKLDNIQHFYMQVDQRHRVDMLRKLAHVEDFRGLVFFNSLSDLGNAEEKLQYRDILAVSLASDVNVKFRKIILEKFKDNQLTLLLATDLLARGIDIDSLECVVNFDIPRDSETYTHRAGRTGRMGKEGYVITLVTHPEEIKKLKKFASIREIVLKNQELYIK

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_7(3FHT)
DD19B_HUMAN
[Raw transfer]



ANP_B_12(3FHT)
DD19B_HUMAN
[Raw transfer]



ANP_A_3(3G0H)
DD19B_HUMAN
[Raw transfer]



ADP_A_3(4D26)
?
[Raw transfer]



8OD_B_7(3NBF)
?
[Raw transfer]



ADP_A_3(3PEY)
DBP5_YEAST
[Raw transfer]



ADP_A_3(3PEW)
DBP5_YEAST
[Raw transfer]



M2A_A_3(5ELX)
DBP5_YEAST
[Raw transfer]



ADP_B_8(3FE2)
DDX5_HUMAN
[Raw transfer]



ADP_A_4(3FE2)
DDX5_HUMAN
[Raw transfer]



ADP_A_3(3DKP)
DDX52_HUMAN
[Raw transfer]



AMP_A_2(2GXQ)
?
[Raw transfer]



8OP_C_10(3NBF)
?
[Raw transfer]



8OX_B_6(3MWL)
?
[Raw transfer]



AMP_A_8(2GXS)
?
[Raw transfer]



8OP_B_6(3MWK)
?
[Raw transfer]



AMP_B_9(2GXS)
?
[Raw transfer]



8OD_A_5(3NBF)
?
[Raw transfer]



1PE_A_4(4BRW)
DHH1_YEAST
[Raw transfer]



EOH_A_4(2PL3)
DDX10_HUMAN
[Raw transfer]
91 HHSearch 74.7233% -3 - C2 -5IVL - ? -
1 PsiBlast_PDB 74.3333% -1 - C2 -5IVL - ? -
99 HHSearch 73.7528% -9 * C3 *1S2M - DHH1_YEAST -
95 HHSearch 72.9426% 4 - C2 -4D26 3.9 ?
97 HHSearch 72.6530% -0 - C2 -4CT4 - DDX6_HUMAN -
96 HHSearch 72.3526% 5 - C2 -4D25 - ? -
108 HHSearch 71.4829% -14 - C2 -1HV8 - H669_METJA -
93 HHSearch 70.8426% 14 - C2 -2DB3 - VASA1_DROME -
2 PsiBlast_PDB 70.7931% 0 - C2 -1HV8 - H669_METJA -
7 PsiBlast_PDB 69.6629% -10 - C2 -4BRW 1.8 DHH1_YEAST
94 HHSearch 69.6029% 15 - C3 -4LJY - PRP5_YEAST -
6 PsiBlast_PDB 68.5029% -14 - C2 -4BRU - DHH1_YEAST -
28 PsiBlast_CBE 68.3031% 5 - C2 -3G0H 8.2 DD19B_HUMAN
100 HHSearch 68.1429% 16 - C3 -4W7S - PRP28_YEAST -
3 PsiBlast_PDB 68.0631% 2 - C2 -4CT4 - DDX6_HUMAN -
4 PsiBlast_PDB 67.9331% -2 - C2 -4CT5 - DDX6_HUMAN -
27 PsiBlast_CBE 67.9231% 2 - C2 -3FHT 7.7 DD19B_HUMAN
8 PsiBlast_PDB 67.4529% -3 - C2 -1S2M - DHH1_YEAST -
11 PsiBlast_PDB 66.9831% 12 - C2 -3RRN - DBP5_YEAST -
107 HHSearch 66.7726% -13 - C2 -2J0U - IF4A3_HUMAN -
9 PsiBlast_PDB 65.5531% 17 - C2 -3PEW 6.0 DBP5_YEAST
12 PsiBlast_PDB 65.4731% 13 - C2 -3PEY 7.8 DBP5_YEAST
26 PsiBlast_CBE 65.3231% 6 - C2 -3FHT 8.5 DD19B_HUMAN
32 PsiBlast_CBE 55.3232% -7 - C2 -3FE2 5.4 DDX5_HUMAN
31 PsiBlast_CBE 53.2332% -3 - C2 -3FE2 6.5 DDX5_HUMAN
46 PsiBlast_CBE 47.4431% -14 - C2 -2GXS 5.0 ?
47 PsiBlast_CBE 46.8731% -16 - C2 -2GXS 6.1 ?
48 PsiBlast_CBE 46.8131% -20 - C2 -2GXQ 5.9 ?
44 PsiBlast_CBE 42.7232% -11 - C2 -3DKP 6.3 DDX52_HUMAN
43 PsiBlast_CBE 42.1732% 6 - C2 -2PL3 3.1 DDX10_HUMAN