@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1354: (2018-01-10 )
MLELRNINKVFGDKQILSNFSLSIPEKQILAIVGPSGGGKTTLLRMLAGLETIDSGQIFYNGQPLELDELQKRNLLGFVFQDFQLFPHLSVLENLTLSPVKTMGMKQEEAEKKASGLLEQLGLGGHAEAYPFSLSGGQKQRVALARAMMIDPEIIGYDEPTSALDPELRLEVEKLILQNRELGMTQIVVTHDLQFAENIADVLLKVEPK

Atome Classification :

(36 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_6(4YMV)
?
[Raw transfer]



ANP_K_6(3C41)
?
[Raw transfer]



ATP_J_5(4YMU)
?
[Raw transfer]



ATP_A_7(4YMU)
?
[Raw transfer]



ATP_J_5(4YMV)
?
[Raw transfer]



AGS_B_6(3C4J)
?
[Raw transfer]



ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]



ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]



ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]



ACP_A_4(5X40)
CBIO_RHOCB
[Raw transfer]



ACP_B_6(5X40)
CBIO_RHOCB
[Raw transfer]



ADP_B_2(2FF7)

[Raw transfer]



AGS_A_4(3C4J)
?
[Raw transfer]



12D_A_2(3B5J)

[Raw transfer]



128_A_2(2PMK)

[Raw transfer]



ADP_A_5(2Q0H)
?
[Raw transfer]



ADP_B_6(2OLJ)
?
[Raw transfer]



ADP_A_5(2OLJ)
?
[Raw transfer]



ADP_B_6(2Q0H)
?
[Raw transfer]



ADP_A_2(4U00)
?
[Raw transfer]



AT4_D_8(2OLK)
?
[Raw transfer]



AT4_B_6(2OLK)
?
[Raw transfer]



ATP_C_3(1VCI)
?
[Raw transfer]



AT4_A_5(2OLK)
?
[Raw transfer]



AT4_C_7(2OLK)
?
[Raw transfer]



LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]



LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]
138 HHSearch 80.5438%-120 * C1 *3RLF - MALK_ECOLI -
44 PsiBlast_CBE 79.4939%-119 - C1 -4KI0 - MALK_ECOLI -
54 PsiBlast_CBE 79.3639%-118 - C1 -3PUW - MALK_ECOLI -
50 PsiBlast_CBE 79.1139%-121 - C1 -3PUY - MALK_ECOLI -
53 PsiBlast_CBE 78.8139%-117 - C1 -3PUW - MALK_ECOLI -
52 PsiBlast_CBE 78.6639%-117 - C1 -3PUX - MALK_ECOLI -
45 PsiBlast_CBE 78.6439%-118 - C1 -3RLF - MALK_ECOLI -
56 PsiBlast_CBE 78.6339%-120 - C1 -3PUV - MALK_ECOLI -
34 PsiBlast_CBE 78.6243% -60 - C1 -4YMV 5.8 ?
46 PsiBlast_CBE 78.4639%-120 - C1 -3RLF - MALK_ECOLI -
139 HHSearch 78.0038%-113 - C1 -2AWN - MALK_ECOLI -
51 PsiBlast_CBE 77.9939%-116 - C1 -3PUX - MALK_ECOLI -
6 PsiBlast_PDB 77.6844% -55 - C1 -3C4J 6.3 ?
49 PsiBlast_CBE 77.5539%-114 - C1 -3PUY - MALK_ECOLI -
47 PsiBlast_CBE 77.4739%-115 - C1 -3PUZ - MALK_ECOLI -
29 PsiBlast_CBE 77.0044% -55 - C1 -2OLK 5.5 ?
1 PsiBlast_PDB 76.9844% -53 - C1 -3C41 - ? -
35 PsiBlast_CBE 76.9343% -55 - C1 -4YMU 5.8 ?
48 PsiBlast_CBE 76.9139%-117 - C1 -3PUZ - MALK_ECOLI -
22 PsiBlast_CBE 76.9044% -49 - C1 -3C4J 4.9 ?
2 PsiBlast_PDB 76.8944% -61 - C1 -2OLJ 6.3 ?
30 PsiBlast_CBE 76.8544% -49 - C1 -2OLJ 5.3 ?
12 PsiBlast_PDB 76.3143% -58 - C1 -4YMV 5.4 ?
3 PsiBlast_PDB 76.2644% -58 - C1 -2OLK 6.0 ?
21 PsiBlast_CBE 75.7144% -55 - C1 -3C41 6.3 ?
69 PsiBlast_CBE 75.4338% -32 - C1 -1B0U 6.3 HISP_SALTY
27 PsiBlast_CBE 75.3544% -58 - C1 -2OLK 5.5 ?
5 PsiBlast_PDB 75.1944% -54 - C1 -2Q0H 5.1 ?
11 PsiBlast_PDB 74.4543% -56 - C1 -4YMU 6.0 ?
28 PsiBlast_CBE 74.3544% -54 - C1 -2OLK 6.0 ?
7 PsiBlast_PDB 73.9044% -28 - C1 -4U00 6.3 ?
23 PsiBlast_CBE 72.6944% -54 - C1 -2Q0H 5.4 ?
87 PsiBlast_CBE 69.8841% -18 - C1 -3FVQ 7.1 FBPC_NEIG1
88 PsiBlast_CBE 69.7641% -19 - C1 -3FVQ 7.0 FBPC_NEIG1
68 PsiBlast_CBE 64.5137%-100 - C1 -1VCI 4.8 ?
105 PsiBlast_CBE 55.7834% -47 - C1 -2FF7 5.8