@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1377: (2018-01-10 )
MSKELHINTILAQAGIKSDEATGALVTPLHFSTTYQHPEFGRSTGFDYTRTKNPTRSKAEEVLAAIESADYALATSSGMSAIVLAFSVFPVGSKVLAVRDLYGGSFRWFNQVEQEGRFHFTYANTEEELIAELEKDVDVLYIETPTNPLMLEFDIEKLAKLAHAKGAKVVVDNTFYSPIYQRPIEDGADIVLHSATKYLAGHNDVLAGVVVTNSLELYEKLFYNLNTTGAVLSPFDSYQLLRGLKTLSLRMERSTANAQEVVAFLKDSPAVKEVLYTGRGGMISFKVADETRIPHILNSLKVFSFAESLGGVESLITYPTTQTHADIPAEVRHSYGLTDDLLRLSIGIEDARDLIADLRQALEG

Atome Classification :

(42 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PLG_A_2(4HF8)
?
[Raw transfer]



LCS_A_2(4OMA)
?
[Raw transfer]



PPJ_A_3(1E5E)
?
[Raw transfer]



PPJ_A_3(1E5E)
?
[Raw transfer]



PY6_A_5(5M3Z)
?
[Raw transfer]



PLP_B_8(1E5F)
?
[Raw transfer]



PLP_A_3(1E5F)
?
[Raw transfer]



PPJ_B_7(1E5E)
?
[Raw transfer]



PLP_A_2(5K30)
?
[Raw transfer]



PZP_A_2(3MKJ)
?
[Raw transfer]



PLP_A_2(5X5H)
?
[Raw transfer]



PLP_A_2(5X5H)
?
[Raw transfer]



PLP_B_5(5DX5)
?
[Raw transfer]



PLP_A_11(1IBJ)
METC_ARATH
[Raw transfer]



PLP_A_3(5DX5)
?
[Raw transfer]



NLE_A_2(3JWB)
?
[Raw transfer]



PLP_A_5(5E4Z)
?
[Raw transfer]



PLP_B_4(5IJG)
?
[Raw transfer]



PLP_C_13(1IBJ)
METC_ARATH
[Raw transfer]



MPJ_A_2(3JWA)
?
[Raw transfer]



EDO_A_22(1PFF)
?
[Raw transfer]



ECX_A_2(3JW9)
?
[Raw transfer]
3 PsiBlast_PDB 88.7039% -23 - C1 -4IY7 - ? -
164 HHSearch 88.3341% -21 - C1 -4IY7 - ? -
28 PsiBlast_CBE 88.2039% -23 - C1 -4IY7 - ? -
30 PsiBlast_CBE 87.8439% -23 - C1 -4IY7 - ? -
4 PsiBlast_PDB 87.1639% -22 - C1 -4IYO - ? -
29 PsiBlast_CBE 86.9739% -21 - C1 -4IY7 - ? -
5 PsiBlast_PDB 86.0339% -28 - C1 -3E6G - ? -
2 PsiBlast_PDB 86.0042% -15 - C1 -1CS1 - METB_ECOLI -
32 PsiBlast_CBE 85.0542% -17 - C1 -1CS1 - METB_ECOLI -
131 PsiBlast_CBE 84.7834% 0 - C- -1I48 - ? -
130 PsiBlast_CBE 84.7834% 0 - C- -1I48 - ? -
129 PsiBlast_CBE 84.7834% 0 - C- -1I48 - ? -
128 PsiBlast_CBE 84.7834% 0 - C- -1I48 - ? -
127 PsiBlast_CBE 84.7834% 0 - C- -1I48 - ? -
126 PsiBlast_CBE 84.7834% 0 - C- -1I48 - ? -
125 PsiBlast_CBE 84.7834% 0 - C- -1I48 - ? -
124 PsiBlast_CBE 84.7834% 0 - C- -1I48 - ? -
123 PsiBlast_CBE 84.7834% 0 - C- -1I48 - ? -
122 PsiBlast_CBE 84.7834% 0 - C- -1I48 - ? -
121 PsiBlast_CBE 84.7834% 0 - C- -1I48 - ? -
49 PsiBlast_CBE 80.6636% -12 - C1 -3JWA 1.3 ?
19 PsiBlast_PDB 80.6136% -13 - C1 -3MKJ 5.9 ?
154 HHSearch 80.1936% -10 - C1 -1E5E 5.3 ?
47 PsiBlast_CBE 79.3036% -10 - C1 -3JW9 1.5 ?
13 PsiBlast_PDB 78.7636% -11 - C1 -4OMA 6.5 ?
15 PsiBlast_PDB 78.3837% -10 - C1 -4HF8 6.0 ?
78 PsiBlast_CBE 77.8335% -9 - C1 -1E5F 3.6 ?
48 PsiBlast_CBE 77.5636% -8 - C1 -3JWB 2.3 ?
77 PsiBlast_CBE 77.5135% -10 - C1 -1E5F 3.6 ?
16 PsiBlast_PDB 77.2736% -7 - C1 -5M3Z 5.2 ?
10 PsiBlast_PDB 77.0936% -13 - C1 -5E4Z 3.6 ?
18 PsiBlast_PDB 76.8236% -10 - C1 -5K30 4.1 ?
79 PsiBlast_CBE 76.8135% -7 - C1 -1E5E 4.9 ?
80 PsiBlast_CBE 76.3435% -9 - C1 -1E5E 5.3 ?
31 PsiBlast_CBE 75.4638% -12 - C1 -1IBJ 3.3 METC_ARATH
6 PsiBlast_PDB 75.4538% -10 - C1 -1IBJ 4.0 METC_ARATH
112 PsiBlast_CBE 75.3938% -11 - C1 -1PFF 2.0 ?
20 PsiBlast_PDB 74.6437% -3 - C1 -5DX5 4.1 ?
149 HHSearch 73.3841% 10 - C1 -5X5H 3.8 ?
165 HHSearch 72.3534% -12 - C1 -5IJG 4.3 ?
41 PsiBlast_CBE 71.1237% 2 - C1 -5DX5 3.4 ?
8 PsiBlast_PDB 68.1340% 13 - C1 -5X5H 3.8 ?