@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1379: (2018-01-10 )
MNFNHVYFGYDENRPVLKDITCSIFKGQKIAFVGPSGSGKSTIVRLLEQFYKPLSGDILMEQSSIYDFNLKEWRSKIAWVSQNNAVLSGSIRDNLCLGLNRLVTDDELMKVLDLVSLGDEIRSMKEGLDTEVGERGRLLSGGAKPKTSNS

Atome Classification :

(59 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_C_9(1MV5)
LMRA_LACLA
[Raw transfer]




ADP_A_5(2HYD)
Y1866_STAAM
[Raw transfer]




ACP_A_4(4AYT)
ABCBA_HUMAN
[Raw transfer]




ATP_A_2(4K8O)

[Raw transfer]




ATP_H_8(2FGJ)

[Raw transfer]




ATP_E_5(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ATP_F_6(2FGK)
HLYBP_ECOLX
[Raw transfer]




ACP_A_4(4AYX)
ABCBA_HUMAN
[Raw transfer]




ANP_B_7(2ONJ)
Y1866_STAAM
[Raw transfer]




ADP_B_8(1MV5)
LMRA_LACLA
[Raw transfer]




ATP_H_8(2FGK)

[Raw transfer]




ADP_B_6(2HYD)
Y1866_STAAM
[Raw transfer]




ANP_A_8(2ONJ)
Y1866_STAAM
[Raw transfer]




ATP_C_11(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_D_12(1XEF)

[Raw transfer]




AGS_A_3(4S0F)
?
[Raw transfer]




ADP_A_3(1JJ7)

[Raw transfer]




ATP_B_10(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_A_3(2IXE)
TAP1_RAT
[Raw transfer]




ATP_A_2(2IXG)

[Raw transfer]




ANP_A_3(4PL0)
MCJD_ECOLX
[Raw transfer]




ANP_A_3(5EG1)
MCJD_ECOLX
[Raw transfer]




ATP_A_7(1MV5)
LMRA_LACLA
[Raw transfer]




ATP_A_9(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_B_8(2IXF)
TAP1_RAT
[Raw transfer]




ATP_D_15(2IXF)

[Raw transfer]




ATP_C_12(2IXF)
TAP1_RAT
[Raw transfer]




ADP_D_10(1MV5)

[Raw transfer]




ATP_E_5(2FGK)
HLYBP_ECOLX
[Raw transfer]




ANP_B_6(4PL0)
MCJD_ECOLX
[Raw transfer]




ATP_F_6(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ADP_A_2(3NHB)

[Raw transfer]




ADP_A_3(3NHA)

[Raw transfer]




ATP_G_7(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ATP_G_7(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_A_5(2IXF)
TAP1_RAT
[Raw transfer]




ANP_B_5(5EG1)
MCJD_ECOLX
[Raw transfer]




ATP_A_2(3NH9)

[Raw transfer]




128_A_2(2PMK)

[Raw transfer]




AGS_B_4(4S0F)
?
[Raw transfer]




12D_A_2(3B5J)

[Raw transfer]




ANP_A_6(3B5Y)
MSBA_SALTY
[Raw transfer]




ANP_D_7(3B5Y)
MSBA_SALTY
[Raw transfer]




ANP_B_5(3B5Y)
MSBA_SALTY
[Raw transfer]




ANP_C_8(3B5Y)
MSBA_SALTY
[Raw transfer]




ADP_C_7(3B5Z)
MSBA_SALTY
[Raw transfer]




ADP_B_6(3B5Z)
MSBA_SALTY
[Raw transfer]




ADP_D_8(3B5Z)
MSBA_SALTY
[Raw transfer]




ADP_A_5(3B5Z)
MSBA_SALTY
[Raw transfer]




22 PsiBlast_CBE 90.3443%-131 - C1 -1MV5 6.0 LMRA_LACLA
23 PsiBlast_CBE 89.9743%-122 - C1 -1MV5 6.8 LMRA_LACLA
1 PsiBlast_PDB 87.7143%-117 - C1 -1MV5 5.0 LMRA_LACLA
5 PsiBlast_PDB 83.4941%-145 - C1 -4S0F 3.2 ?
166 HHSearch 82.4138%-139 - C1 -4MYC - ATM1_YEAST -
167 HHSearch 81.8038%-135 - C1 -4MYC - ATM1_YEAST -
21 PsiBlast_CBE 80.5743%-118 - C1 -1MV5 5.0
26 PsiBlast_CBE 80.1241%-142 - C1 -4S0F 1.4 ?
6 PsiBlast_PDB 79.6341% - - C1 -4RY2 - ? -
13 PsiBlast_PDB 76.6837% -77 - C1 -3NH6 - -
19 PsiBlast_PDB 76.6438% -4 - C1 -4AYX 5.9 ABCBA_HUMAN
173 HHSearch 76.6238% - - C1 -4Q4H - Y288_THEMA -
162 HHSearch 75.6336%-141 - C1 -4MRP - ATM1_NOVAD -
172 HHSearch 75.1638%-119 - C1 -3QF4 - Y288_THEMA -
169 HHSearch 75.1039% -4 - C1 -4AYX - ABCBA_HUMAN -
17 PsiBlast_PDB 74.4938% -6 - C1 -4AYW - ABCBA_HUMAN -
18 PsiBlast_PDB 73.9338% 5 - C1 -4AYT 6.0 ABCBA_HUMAN
7 PsiBlast_PDB 73.8141% -9 - C1 -4F4C - PGP1_CAEEL -
20 PsiBlast_PDB 73.3238% -4 - C1 -3ZDQ - ABCBA_HUMAN -
170 HHSearch 73.0939% 5 - C1 -4AYT - ABCBA_HUMAN -
16 PsiBlast_PDB 72.1837% -78 - C1 -3NHB 6.7
3 PsiBlast_PDB 71.6242% 21 - C1 -2ONJ 6.0 Y1866_STAAM
15 PsiBlast_PDB 71.5237% -76 - C1 -3NHA 6.7
24 PsiBlast_CBE 71.2242% 22 - C1 -2ONJ 6.0 Y1866_STAAM
2 PsiBlast_PDB 71.2242% 18 - C1 -2HYD 4.9 Y1866_STAAM
14 PsiBlast_PDB 70.5637% -69 - C1 -3NH9 6.8
25 PsiBlast_CBE 70.0142% 19 - C1 -2HYD 4.7 Y1866_STAAM
85 PsiBlast_CBE 68.8933% - - C1 -3B5Y 2.2 MSBA_SALTY
84 PsiBlast_CBE 68.8933% - - C1 -3B5Y 2.0 MSBA_SALTY
83 PsiBlast_CBE 68.8933% - - C1 -3B5Y 2.0 MSBA_SALTY
82 PsiBlast_CBE 68.8933% - - C1 -3B5Y 2.0 MSBA_SALTY
81 PsiBlast_CBE 68.8333% - - C1 -3B5Z 2.3 MSBA_SALTY
79 PsiBlast_CBE 68.8333% - - C1 -3B5Z 2.3 MSBA_SALTY
80 PsiBlast_CBE 68.8233% - - C1 -3B5Z 2.9 MSBA_SALTY
78 PsiBlast_CBE 68.8233% - - C1 -3B5Z 2.5 MSBA_SALTY
45 PsiBlast_CBE 65.9635% -6 - C1 -2IXE 8.1 TAP1_RAT
42 PsiBlast_CBE 65.6635% 20 - C1 -2IXF 8.2 TAP1_RAT
102 PsiBlast_CBE 65.3734% -21 - C1 -2FGJ 7.5 HLYBP_ECOLX
73 PsiBlast_CBE 65.2534% 22 - C1 -2IXG 7.8
88 PsiBlast_CBE 65.1733% 14 - C1 -1JJ7 6.6
99 PsiBlast_CBE 64.9534% -12 - C1 -2FGJ 7.8
46 PsiBlast_CBE 63.6035% 13 - C1 -4K8O 7.4
107 PsiBlast_CBE 63.5034% -17 - C1 -1XEF 6.7 HLYBP_ECOLX
105 PsiBlast_CBE 63.4534% -20 - C1 -1XEF 7.6 HLYBP_ECOLX
114 PsiBlast_CBE 63.2331%-137 - C1 -4PL0 6.8 MCJD_ECOLX
41 PsiBlast_CBE 62.5635% 13 - C1 -2IXF 8.4
100 PsiBlast_CBE 62.1134% -18 - C1 -2FGJ 6.7 HLYBP_ECOLX
101 PsiBlast_CBE 61.3634% -11 - C1 -2FGJ 7.5 HLYBP_ECOLX
43 PsiBlast_CBE 60.7735% 25 - C1 -2IXF 7.8 TAP1_RAT
113 PsiBlast_CBE 60.7431%-128 - C1 -4PL0 6.7 MCJD_ECOLX
111 PsiBlast_CBE 60.6631%-128 - C1 -5EG1 6.5 MCJD_ECOLX
106 PsiBlast_CBE 59.9534% -11 - C1 -1XEF 7.8 HLYBP_ECOLX
95 PsiBlast_CBE 59.1434% -14 - C1 -2FGK 7.6 HLYBP_ECOLX
93 PsiBlast_CBE 59.1134% -19 * C1 *2FGK 7.7
44 PsiBlast_CBE 59.1135% 28 - C1 -2IXF 7.8 TAP1_RAT
112 PsiBlast_CBE 58.8831%-131 - C1 -5EG1 6.4 MCJD_ECOLX
104 PsiBlast_CBE 57.6634% -13 - C1 -1XEF 7.5
96 PsiBlast_CBE 56.3334% -19 - C1 -2FGK 7.5 HLYBP_ECOLX
94 PsiBlast_CBE 54.9234% -14 - C1 -2FGK 6.4 HLYBP_ECOLX