@TOME V2.3
(Mar 2018)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1410: (2018-01-11 )
MSKEQKRQAFYTQSPEEVLQAVDATEQGLSSSEAEKRLAEFGHNELEEGEKRSILVKFIEQFKDLMIIILVAAAILSVVTSGGEDIADAIIILAVVIINAAFGVYQEGKAEEAIEALKSMSSPVARVLRDGHMAEIDSKELVPGDIVALEAGDVVPADLRLIEANSLKIEEAALTGESVPVEKDLSVDLATDAGIGDRVNMAFQNSNVTYGRGMGVVVNTGMYTEVGHIAGMLQDADETDTPLKQNLNNLSKVLTYAILVIALVTFVVGVFIQGKNPLGELLTSVALAVAAIPEGLPAIVTIVLSLGTQVLAKRHSIVRKLPAVETLGSTEIIASDKTGTLTMNKMTVEKVFYDAVLHDSADDIELGLEMPLLRSVVLANDTKIDVEGNLIGDPTETAFIQYALDKGYDVKGFLEKYPRVAELPFDSDRKLMSTVHPLPDSRFLVAVKGAPDQLLKRCLLRDKAGDIAPIDEKVTNLIHTNNSEMAHQALRVLAGAYKIIDSIPENLTSEELENDLIFTGLIGMIDPERPEAAEAVRVAKEAGIRPIMITGDHQDTAEAIAKRLGIIDANDTEGHVLTGAELNELSDEEFEKVVGQYSVYARVSPEHKVRIVKAWQKQGKVVAMTGDGVNDAPALKTADIGIGMGITGTEVSKGASDMILADDNFATIIVAVEEGRKVFSNIQKTIQYLLSANTAEVLTIFLSTLFGWDVLQPVHLLWINLVTDTFPAIALGVEPAEPGVMNHKPRGRKASFFSGGVLSSIIYQGVLQAALVMSVYGLAIAYPVHVGDNHAIHADALTMAFATLGLIQLFHAYNVKSVYQSILTVGPFKSKTFNWSILVSFILLMATIVVEPLEGIFHVTKLDLSQWGIVMAGSFSMIIIVEIVKFIQRKLGFDKNAI

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

7BS_A_5(4YCM)
AT2A1_RABIT
[Raw transfer]



7BL_A_5(4YCN)
AT2A1_RABIT
[Raw transfer]



CZA_A_4(4YCL)
AT2A1_RABIT
[Raw transfer]



CZA_A_4(2EAT)
AT2A1_RABIT
[Raw transfer]



PCW_A_3(4UU1)
AT2A1_RABIT
[Raw transfer]



PTY_A_3(4J2T)
AT2A1_RABIT
[Raw transfer]



PTY_A_5(3AR7)
AT2A1_RABIT
[Raw transfer]



PTY_A_5(3NAM)
?
[Raw transfer]



PTY_A_7(3AR4)
AT2A1_RABIT
[Raw transfer]



PTY_A_5(3NAN)
?
[Raw transfer]



PTY_A_7(3AR4)
AT2A1_RABIT
[Raw transfer]



PTY_A_6(3AR6)
AT2A1_RABIT
[Raw transfer]



PTY_A_6(3AR3)
?
[Raw transfer]



PTY_A_3(3W5D)
AT2A1_RABIT
[Raw transfer]



PCW_A_15(5XA8)
AT2A1_RABIT
[Raw transfer]
69 PsiBlast_CBE 95.4835% 0 - C- -1WPG - AT2A1_RABIT -
68 PsiBlast_CBE 95.4835% 0 - C- -1WPG - AT2A1_RABIT -
67 PsiBlast_CBE 95.4835% 0 - C- -1WPG - AT2A1_RABIT -
7 PsiBlast_PDB 95.4835% 0 - C- -1WPG - AT2A1_RABIT -
119 HHSearch 78.2537% -6 - C1 -3AR4 2.6 AT2A1_RABIT
115 HHSearch 76.9932% -14 - C1 -2ZXE - ? -
105 Fugue 75.9237% -9 - C1 -1SU4 - AT2A1_RABIT -
16 PsiBlast_PDB 74.4035% -3 - C1 -2OA0 - AT2A1_RABIT -
31 PsiBlast_CBE 74.0135% 6 - C1 -4UU0 - AT2A1_RABIT -
52 PsiBlast_CBE 73.9235% 6 - C1 -3AR5 - AT2A1_RABIT -
51 PsiBlast_CBE 73.7635% 5 - C1 -3AR6 2.9 AT2A1_RABIT
32 PsiBlast_CBE 73.6835% 3 - C1 -4J2T 4.3 AT2A1_RABIT
64 PsiBlast_CBE 73.4735% 6 - C1 -2DQS - AT2A1_RABIT -
53 PsiBlast_CBE 73.3735% 8 - C1 -3AR4 2.6 AT2A1_RABIT
54 PsiBlast_CBE 73.3135% 8 - C1 -3AR3 2.4 ?
72 PsiBlast_CBE 73.2635% 4 - C1 -4YCN 7.5 AT2A1_RABIT
39 PsiBlast_CBE 73.2235% 4 - C1 -3NAL - ? -
21 PsiBlast_CBE 73.1635% 3 - C1 -5XAB - ? -
38 PsiBlast_CBE 73.0635% 1 - C1 -3NAM 4.0 ?
33 PsiBlast_CBE 73.0535% 6 - C1 -3W5D 2.8 AT2A1_RABIT
50 PsiBlast_CBE 72.8935% 5 - C1 -3AR7 2.8 AT2A1_RABIT
37 PsiBlast_CBE 72.6835% 4 - C1 -3NAN 3.9 ?
62 PsiBlast_CBE 72.1635% 5 - C1 -2EAT 6.2 AT2A1_RABIT
30 PsiBlast_CBE 72.1035% 5 - C1 -4UU1 3.4 AT2A1_RABIT
24 PsiBlast_CBE 68.6235% 7 - C1 -5XA8 2.9 AT2A1_RABIT