@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1421: (2018-01-11 )
MSQLYDITIVGGGPVGLFAAFYAHLRQAKVQIIDSLPQLGGQPAILYPEKEILDVPGFPNLTGEELTNRLIEQLNGFDTPIHLNETVLEIDKQEEEFAITTSKGSHLTKTVIIAMGGGAFKPRPLELEGVEDYENIHYHVSNIQQYAGKKVTILGGGDSAVDWALAFEKIAPTTLVHRRDNFRALEHSVQALQESSVTIKTPFAPSQLLGDGKTLDKLEITKVKSDETETIDLDHLFVNYGFKSSVGNLKNWGLDLNRHKIIVNSKQESSQAGIYAIGDCCYYDGKIDLIATGLGEAPTAVNNAINYIDPEQKVQPKHSTSL

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_B_6(3LZX)
FENR2_BACSU
[Raw transfer]




FAD_A_3(3LZX)
FENR2_BACSU
[Raw transfer]




FAD_B_6(3LZX)
FENR2_BACSU
[Raw transfer]




FAD_A_3(3AB1)
FENR_CHLTE
[Raw transfer]




FAD_A_3(3AB1)
FENR_CHLTE
[Raw transfer]




FAD_B_4(3AB1)
FENR_CHLTE
[Raw transfer]




FAD_B_4(3AB1)
FENR_CHLTE
[Raw transfer]




NAP_A_3(3LZW)
FENR2_BACSU
[Raw transfer]




50 HHSearch 84.8956% -22 - C1 -3LZX 13.3 FENR2_BACSU
21 PsiBlast_CBE 84.8055% -22 - C1 -3LZX 13.3 FENR2_BACSU
1 PsiBlast_PDB 83.5255% -25 - C1 -3LZW - FENR2_BACSU -
49 HHSearch 83.3056% -25 - C1 -3LZW 10.3 FENR2_BACSU
2 PsiBlast_PDB 83.3055% -21 - C1 -3LZX 13.3 FENR2_BACSU
3 PsiBlast_PDB 70.0939% -17 - C1 -2ZBW - FENR_THET8 -
52 HHSearch 67.9937% -17 - C1 -3AB1 12.5 FENR_CHLTE
4 PsiBlast_PDB 66.0737% -22 - C1 -3AB1 12.5 FENR_CHLTE
51 HHSearch 65.9639% -12 - C1 -2ZBW - FENR_THET8 -
53 HHSearch 65.8437% -11 - C1 -3AB1 13.4 FENR_CHLTE
22 PsiBlast_CBE 64.5137% -9 - C1 -3AB1 13.4 FENR_CHLTE
58 HHSearch 59.3727% -31 - C1 -5MIT - ? -
56 HHSearch 56.5524% -24 - C1 -3F8P - ? -
12 PsiBlast_PDB 55.9629% 17 - C1 -5U63 - TRXB_HAEIN -
57 HHSearch 55.0828% -7 - C1 -5UWY - ? -
60 HHSearch 55.0024% 6 - C1 -1FL2 - AHPF_ECOLI -
11 PsiBlast_PDB 53.9727% 26 - C1 -5MJK - ? -
15 PsiBlast_PDB 53.8628% 19 - C1 -5VT3 - ? -
64 HHSearch 53.6028% 17 - C1 -5VT3 - ? -
69 Fugue 53.5825% 38 - C1 -1HYU - AHPF_SALTY -