@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1432: (2018-01-12 )
MSRKPFIAGNWKMNKNPEEAKAFVEAVASKLPSSDLVEAGIAAPALDLTTVLAVAKGSNLKVAAQNCYFENAGAFTGETSPQVLKEIGTDYVVIGHSERRDYFHETDEDINKKAKAIFANGMLPIICCGESLETYEAGKAAEFVGAQVSAALAGLTAEQVAASVIAYEPIWAIGTGKSASQDDAQKMCKVVRDVVAADFGQEVADKVRVQYGGSVKPENVASYMACPDVDGALVGGASLEAESFLALLDFVK

Atome Classification :

(82 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

G3P_B_5(3UWU)
TPIS_STAAR
[Raw transfer]




G3P_A_3(3UWU)
TPIS_STAAR
[Raw transfer]




PGH_A_3(3TAO)
TPIS_MYCTU
[Raw transfer]




PGA_A_3(1BTM)
TPIS_GEOSE
[Raw transfer]




PGH_A_2(2VXN)
TPIS_LEIME
[Raw transfer]




PGH_A_2(2VXN)
TPIS_LEIME
[Raw transfer]




G2H_A_3(3UWZ)
TPIS_STAAR
[Raw transfer]




3PG_A_3(2VFI)
TPIS_PLAFA
[Raw transfer]




PGA_D_4(2BTM)
TPIS_GEOSE
[Raw transfer]




PGA_C_3(2BTM)
TPIS_GEOSE
[Raw transfer]




PGA_A_2(1LYX)
TPIS_PLAFA
[Raw transfer]




PGA_C_3(2BTM)
TPIS_GEOSE
[Raw transfer]




PGA_B_4(2YPI)
TPIS_YEAST
[Raw transfer]




PGH_B_4(7TIM)
TPIS_YEAST
[Raw transfer]




PGA_C_3(1AMK)
TPIS_LEIME
[Raw transfer]




PGA_C_3(2BTM)
TPIS_GEOSE
[Raw transfer]




13P_B_14(4YMZ)
TPIS_LEPIN
[Raw transfer]




PGA_C_3(1QDS)
TPIS_LEIME
[Raw transfer]




3PG_A_3(2VFH)
TPIS_PLAFA
[Raw transfer]




PGA_A_2(4BI6)
TPI1_GIAIN
[Raw transfer]




13P_A_3(4YMZ)
TPIS_LEPIN
[Raw transfer]




PGA_A_2(1N55)
TPIS_LEIME
[Raw transfer]




3PG_B_4(2VFH)
TPIS_PLAFA
[Raw transfer]




3PG_C_3(1M7O)
TPIS_PLAFA
[Raw transfer]




PGA_A_3(4FF7)
TPIS_YEAST
[Raw transfer]




PGA_B_4(1BTM)
TPIS_GEOSE
[Raw transfer]




129_C_3(1IF2)
TPIS_LEIME
[Raw transfer]




129_C_3(1IF2)
TPIS_LEIME
[Raw transfer]




3PG_A_4(3UWW)
TPIS_STAAR
[Raw transfer]




PGA_A_3(2YPI)
TPIS_YEAST
[Raw transfer]




PGA_A_2(4BI7)
TPI1_GIAIN
[Raw transfer]




PGH_A_3(7TIM)
TPIS_YEAST
[Raw transfer]




3PG_B_5(2VFI)
TPIS_PLAFA
[Raw transfer]




3PG_B_6(3UWW)
TPIS_STAAR
[Raw transfer]




PGA_E_5(1LZO)
TPIS_PLAFA
[Raw transfer]




3PG_D_4(1M7O)
TPIS_PLAFA
[Raw transfer]




1GP_A_2(2Y61)
TPIS_LEIME
[Raw transfer]




PGA_F_6(1LZO)
TPIS_PLAFA
[Raw transfer]




GOL_B_4(3GVG)
TPIS_MYCTU
[Raw transfer]




BBR_A_2(2Y63)
TPIS_LEIME
[Raw transfer]




GOL_A_3(3GVG)
TPIS_MYCTU
[Raw transfer]




GOL_A_4(2VFE)
TPIS_PLAFA
[Raw transfer]




G3P_A_2(2Y62)
TPIS_LEIME
[Raw transfer]




G3H_D_4(1M7P)
TPIS_PLAFA
[Raw transfer]




G2H_B_5(3UWZ)
TPIS_STAAR
[Raw transfer]




G3H_C_3(1M7P)
TPIS_PLAFA
[Raw transfer]




PGH_A_3(3YPI)
TPIS_YEAST
[Raw transfer]




GOL_B_6(2VFE)
TPIS_PLAFA
[Raw transfer]




PGH_B_4(3YPI)
TPIS_YEAST
[Raw transfer]




PGH_B_4(3YPI)
TPIS_YEAST
[Raw transfer]




2PG_B_7(3UWV)
TPIS_STAAR
[Raw transfer]




2PG_A_5(3UWV)
TPIS_STAAR
[Raw transfer]




GOL_B_5(3GVG)
TPIS_MYCTU
[Raw transfer]




TRS_H_8(2I9E)
?
[Raw transfer]




GOL_B_18(4FF7)
TPIS_YEAST
[Raw transfer]




UVW_A_4(4MVA)
?
[Raw transfer]




2PG_B_5(1O5X)
TPIS_PLAFA
[Raw transfer]




CIT_B_5(3M9Y)
TPIS_STAAR
[Raw transfer]




2PG_B_5(1O5X)
TPIS_PLAFA
[Raw transfer]




3PY_A_4(1O5X)
TPIS_PLAFA
[Raw transfer]




EDO_B_7(4ZZ9)
TPIS_PLAFA
[Raw transfer]




EDO_D_18(5BMX)
TPIS_PLAFA
[Raw transfer]




EDO_B_9(4YWI)
TPIS_PLAFA
[Raw transfer]




EDO_A_3(4Z0S)
TPIS_PLAFA
[Raw transfer]




EDO_A_4(4ZZ9)
TPIS_PLAFA
[Raw transfer]




EDO_A_4(3PSV)
TPIS_PLAFA
[Raw transfer]




EDO_B_7(3PSW)
TPIS_PLAFA
[Raw transfer]




EDO_A_3(3PSW)
TPIS_PLAFA
[Raw transfer]




PEG_B_9(4MVA)
?
[Raw transfer]




EDO_B_16(4Z0J)
TPIS_PLAFA
[Raw transfer]




EDO_B_16(4Z0J)
TPIS_PLAFA
[Raw transfer]




MRD_A_2(4MKN)
?
[Raw transfer]




EDO_A_5(4YXG)
TPIS_PLAFA
[Raw transfer]




TRS_I_9(2I9E)
?
[Raw transfer]




1 PsiBlast_PDB 91.49100%-104 - C6 -5IBX - TPIS_STRP2 -
133 HHSearch 89.29100% -99 - C6 -5IBX - TPIS_STRP2 -
8 PsiBlast_PDB 81.1955%-105 - C6 -2BTM 4.0 TPIS_GEOSE
149 HHSearch 80.9054%-106 - C6 -2BTM 4.0 TPIS_GEOSE
33 PsiBlast_CBE 80.7755%-102 - C6 -2BTM 3.1 TPIS_GEOSE
9 PsiBlast_PDB 80.4254%-102 - C6 -1BTM 3.3 TPIS_GEOSE
34 PsiBlast_CBE 78.8254% -99 - C6 -1BTM 3.2 TPIS_GEOSE
20 PsiBlast_PDB 78.4047%-112 - C6 -4Y96 - ? -
134 HHSearch 78.2647%-107 - C6 -4Y96 - ? -
12 PsiBlast_PDB 77.7945%-109 - C6 -1B9B - PGKT_THEMA -
135 HHSearch 77.6544%-119 - C6 -1B9B - -
10 PsiBlast_PDB 76.6552%-109 - C6 -4Y8F - TPIS_CLOPE -
138 HHSearch 76.0752%-107 - C6 -4Y8F - TPIS_CLOPE -
4 PsiBlast_PDB 75.1958% -18 - C6 -3UWV 2.7 TPIS_STAAR
5 PsiBlast_PDB 75.1558% -21 - C6 -3UWW 3.8 TPIS_STAAR
3 PsiBlast_PDB 75.0658% -15 - C6 -3UWU 4.3 TPIS_STAAR
7 PsiBlast_PDB 75.0058% -16 - C6 -3UWZ 2.2 TPIS_STAAR
31 PsiBlast_CBE 74.9058% -18 - C6 -3UWV 3.2 TPIS_STAAR
30 PsiBlast_CBE 74.7758% -16 - C6 -3UWW 3.3 TPIS_STAAR
6 PsiBlast_PDB 74.6558% -22 - C6 -3UWY - TPIS_STAAR -
77 PsiBlast_CBE 74.4841%-111 - C6 -2I9E 3.0 ?
28 PsiBlast_CBE 74.2058% -16 - C6 -3M9Y 2.0 TPIS_STAAR
29 PsiBlast_CBE 74.1358% -19 - C6 -3UWZ 2.1 TPIS_STAAR
75 PsiBlast_CBE 74.1141%-112 - C6 -2I9E 2.9 ?
32 PsiBlast_CBE 74.0958% -15 - C6 -3UWU 4.1 TPIS_STAAR
61 PsiBlast_CBE 74.0542%-113 - C6 -4MVA 3.7 ?
147 HHSearch 73.4236%-108 - C6 -4MKN 2.8 ?
154 Fugue 73.3354% -15 - C6 -2BTM 4.0 TPIS_GEOSE
145 HHSearch 73.1540%-108 - C6 -2VXN 4.3 TPIS_LEIME
94 PsiBlast_CBE 72.9440%-110 - C6 -2Y61 3.7 TPIS_LEIME
155 Fugue 72.8139%-105 - C6 -1IF2 4.4 TPIS_LEIME
93 PsiBlast_CBE 72.5740%-112 - C6 -2Y62 3.7 TPIS_LEIME
92 PsiBlast_CBE 72.4940%-113 - C6 -2Y63 3.1 TPIS_LEIME
60 PsiBlast_CBE 72.4842%-115 - C6 -4MVA 2.0 ?
98 PsiBlast_CBE 72.4440%-109 - C6 -1IF2 4.4 TPIS_LEIME
97 PsiBlast_CBE 72.3540%-111 - C6 -1N55 3.4 TPIS_LEIME
96 PsiBlast_CBE 72.2440%-111 - C6 -1QDS 4.1 TPIS_LEIME
95 PsiBlast_CBE 72.0340%-111 - C6 -2VXN 4.3 TPIS_LEIME
103 PsiBlast_CBE 71.3239%-107 - C6 -1AMK 4.2 TPIS_LEIME
137 HHSearch 70.3839%-101 - C6 -3YPI 3.4 TPIS_YEAST
148 HHSearch 70.1436%-100 - C6 -1O5X 2.5 TPIS_PLAFA
139 HHSearch 69.8037% -99 - C6 -4Z0J 3.2 TPIS_PLAFA
79 PsiBlast_CBE 69.7040% 1 - C6 -4BI7 3.1 TPI1_GIAIN
81 PsiBlast_CBE 69.6140% 2 - C6 -4BI6 3.6 TPI1_GIAIN
43 PsiBlast_CBE 69.3246% -22 - C6 -3GVG 2.9 TPIS_MYCTU
69 PsiBlast_CBE 68.9939% -15 - C6 -4YMZ 3.7 TPIS_LEPIN
19 PsiBlast_PDB 68.9146% -20 - C6 -3GVG 2.3 TPIS_MYCTU
68 PsiBlast_CBE 68.7039% -17 - C6 -4YMZ 3.7 TPIS_LEPIN
18 PsiBlast_PDB 67.7346% -16 - C6 -3TAO 4.0 TPIS_MYCTU
82 PsiBlast_CBE 63.3640% -9 - C6 -7TIM 3.5 TPIS_YEAST
87 PsiBlast_CBE 62.9539% -6 - C6 -4FF7 3.4 TPIS_YEAST
85 PsiBlast_CBE 62.7340% -8 - C6 -2YPI 3.6 TPIS_YEAST
83 PsiBlast_CBE 62.6540% -7 - C6 -7TIM 3.9 TPIS_YEAST
86 PsiBlast_CBE 62.5539% -3 - C6 -4FF7 2.3 TPIS_YEAST
104 PsiBlast_CBE 61.5939% -5 - C6 -3YPI 3.4 TPIS_YEAST
105 PsiBlast_CBE 61.2039% -8 - C6 -3YPI 3.9 TPIS_YEAST
129 PsiBlast_CBE 61.0038% 7 - C6 -4ZZ9 2.5 TPIS_PLAFA
123 PsiBlast_CBE 60.6538% 10 - C6 -2VFH 3.1 TPIS_PLAFA
127 PsiBlast_CBE 60.6038% 8 - C6 -3PSV 2.6 TPIS_PLAFA
126 PsiBlast_CBE 60.3638% 9 - C6 -3PSW 2.4 TPIS_PLAFA
84 PsiBlast_CBE 60.3240% -0 - C6 -2YPI 3.8 TPIS_YEAST
128 PsiBlast_CBE 60.2938% 9 - C6 -4ZZ9 2.5 TPIS_PLAFA
112 PsiBlast_CBE 60.1738% 14 - C6 -2VFI 3.3 TPIS_PLAFA
114 PsiBlast_CBE 60.1038% 5 - C6 -1O5X 2.5 TPIS_PLAFA
100 PsiBlast_CBE 59.9639% 12 - C6 -2VFE 2.5 TPIS_PLAFA
90 PsiBlast_CBE 59.9639% 16 - C6 -4YWI 2.4 TPIS_PLAFA
124 PsiBlast_CBE 59.7338% 15 - C6 -2VFH 3.5 TPIS_PLAFA
125 PsiBlast_CBE 59.7238% 2 - C6 -3PSW 2.3 TPIS_PLAFA
115 PsiBlast_CBE 59.7138% 9 - C6 -1O5X 3.2 TPIS_PLAFA
117 PsiBlast_CBE 59.6638% 10 - C6 -1M7P 2.1 TPIS_PLAFA
119 PsiBlast_CBE 59.5938% 13 - C6 -1M7O 3.6 TPIS_PLAFA
118 PsiBlast_CBE 59.5638% 12 - C6 -1M7O 3.8 TPIS_PLAFA
113 PsiBlast_CBE 59.5538% 16 - C6 -2VFI 3.3 TPIS_PLAFA
111 PsiBlast_CBE 59.5538% 11 - C6 -4YXG 3.0 TPIS_PLAFA
132 PsiBlast_CBE 59.4538% 8 - C6 -5BMX 2.5 TPIS_PLAFA
88 PsiBlast_CBE 59.3739% 11 - C6 -4Z0J 3.2 TPIS_PLAFA
116 PsiBlast_CBE 59.3538% 12 - C6 -1M7P 2.7 TPIS_PLAFA
122 PsiBlast_CBE 59.3138% 16 - C6 -1LYX 3.1 TPIS_PLAFA
110 PsiBlast_CBE 59.1438% 9 - C6 -4Z0S 2.7 TPIS_PLAFA
99 PsiBlast_CBE 59.0539% 10 - C6 -2VFE 2.2 TPIS_PLAFA
121 PsiBlast_CBE 58.5938% 18 - C6 -1LZO 1.9 TPIS_PLAFA
120 PsiBlast_CBE 57.9838% 19 - C6 -1LZO 1.8 TPIS_PLAFA