@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1450: (2018-01-12 )
MKNNRILALSGNDIFSGGGLSADLATYTLNGLHGFVAVTCLTALTEKGFEVFPTDDTIFQHELDSLRDVEFGGIKIGLLPTVSVAEKALDFIKQRPGVPVVLDPVLVCKETHDVAVSELCQELIRFFPYVSVITPNLPEAELLSGQEIKTLEDMKTAAQKLHDLGAPAVIIKGGNRLSQDKAVDVFYDGQTFTILENPVIQGQNAGAGCTFASSIASHLIKGDKLLPAVESSKAFVYRAIAQADQYGVRQYEANKNS

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_H_8(2I5B)
PDXK_BACSU
[Raw transfer]



ACP_B_8(4C5N)
?
[Raw transfer]



ACP_C_12(4C5N)
?
[Raw transfer]



ACP_D_16(4C5N)
?
[Raw transfer]



ACP_A_6(4C5N)
?
[Raw transfer]



ADP_D_17(4C5K)
?
[Raw transfer]



ADP_B_9(4C5K)
?
[Raw transfer]



ADP_A_5(4C5K)
?
[Raw transfer]



ADP_C_13(4C5K)
?
[Raw transfer]



ADP_C_13(4C5K)
?
[Raw transfer]



ACP_A_5(4C5M)
?
[Raw transfer]



ACP_D_20(4C5M)
?
[Raw transfer]



PLP_A_2(4YWR)
?
[Raw transfer]



ACP_C_15(4C5M)
?
[Raw transfer]



ACP_B_10(4C5M)
?
[Raw transfer]



UEG_A_5(4C5L)
?
[Raw transfer]



UEG_C_10(4C5L)
?
[Raw transfer]



EDO_A_3(4YL5)
?
[Raw transfer]
90 HHSearch 78.3838% -13 - C3 -2I5B - PDXK_BACSU -
23 PsiBlast_CBE 78.3438% -2 - C3 -2I5B 6.8 PDXK_BACSU
21 PsiBlast_CBE 78.1038% 1 - C3 -2I5B - PDXK_BACSU -
1 PsiBlast_PDB 77.4838% -1 - C3 -2I5B - PDXK_BACSU -
22 PsiBlast_CBE 77.1338% -2 - C3 -2I5B - PDXK_BACSU -
24 PsiBlast_CBE 74.1738% 1 - C3 -2I5B - PDXK_BACSU -
3 PsiBlast_PDB 72.1837% 4 - C3 -4C5K 6.9 ?
35 PsiBlast_CBE 71.3437% 5 - C3 -4C5K 6.3 ?
33 PsiBlast_CBE 70.2937% 5 - C3 -4C5K 6.0 ?
2 PsiBlast_PDB 69.9737% 7 - C3 -4C5J - ? -
97 HHSearch 69.3536% 4 - C3 -4C5M - ? -
30 PsiBlast_CBE 69.2037% 2 - C3 -4C5M 6.6 ?
32 PsiBlast_CBE 68.8237% 3 - C3 -4C5L 3.8 ?
29 PsiBlast_CBE 68.7837% 6 - C3 -4C5M 6.5 ?
4 PsiBlast_PDB 68.6737% -4 - C3 -4C5L 2.7 ?
26 PsiBlast_CBE 68.5737% 6 - C3 -4C5N 7.5 ?
28 PsiBlast_CBE 68.1037% 4 - C3 -4C5M 6.4 ?
5 PsiBlast_PDB 68.0337% 6 - C3 -4C5M 6.4 ?
34 PsiBlast_CBE 67.9637% 12 - C3 -4C5K 6.5 ?
98 HHSearch 67.9536% 12 - C3 -4C5K 5.9 ?
25 PsiBlast_CBE 67.6737% 4 - C3 -4C5N 7.0 ?
6 PsiBlast_PDB 67.1737% 6 - C3 -4C5N 7.5 ?
27 PsiBlast_CBE 67.0837% 3 - C3 -4C5N 6.9 ?