@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1460: (2018-01-12 )
MQEKILVTGGAGFIGTHTVIELIQAGHQVVVVDNLVNSNRKSLEVVERITGVEIPFYEADIRDTDTLRDIFKQEEPTGVIHFAGLKAVGESTRIPLAYYDNNIAGTVSLLKAMEENNCKNIIFSSSATVYGDPHTVPILEDFPLSVTNPYGRTKLMLEEILTDIYKADSEWNVVLLRYFNPIGAHESGDLGENPNGIPNNLLPYVTQVAVGKLEQVQVFGDDYDTEDGTGVRDYIHVVDLAKGHVAALKKIQKGSGLNVYNLGTGKGYSVLEIIQNMEKAVGCPIPYRIVERRPGDIAACYSDPAKAKAELGWEAELDITQMCEDAWRWQSKHPNGFED

Atome Classification :

(48 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_A_4(1KVQ)
GALE_ECOLI
[Raw transfer]




NAI_B_7(1EK6)
GALE_HUMAN
[Raw transfer]




NAD_A_5(1KVU)
GALE_ECOLI
[Raw transfer]




NAD_A_4(5GY7)
GALE_ECOLI
[Raw transfer]




NAD_A_4(1LRL)
GALE_ECOLI
[Raw transfer]




NAD_A_5(1Z45)
GAL10_YEAST
[Raw transfer]




NAD_A_6(1A9Y)
GALE_ECOLI
[Raw transfer]




NAD_B_10(1I3N)
GALE_HUMAN
[Raw transfer]




NAD_A_5(1A9Z)
GALE_ECOLI
[Raw transfer]




NAD_B_7(5GY7)
GALE_ECOLI
[Raw transfer]




NAD_A_6(1KVR)
GALE_ECOLI
[Raw transfer]




NAD_A_7(1HZJ)
GALE_HUMAN
[Raw transfer]




NAD_C_3(1EK5)
GALE_HUMAN
[Raw transfer]




NAD_A_5(1UDB)
GALE_ECOLI
[Raw transfer]




NAD_C_16(4LIS)
?
[Raw transfer]




NAD_A_6(1A9Y)
GALE_ECOLI
[Raw transfer]




NAD_A_4(5GY7)
GALE_ECOLI
[Raw transfer]




NAD_A_5(1UDC)
GALE_ECOLI
[Raw transfer]




NAD_A_3(1KVT)
GALE_ECOLI
[Raw transfer]




NAD_A_5(1Z45)
GAL10_YEAST
[Raw transfer]




NAD_A_4(1KVS)
GALE_ECOLI
[Raw transfer]




NAD_A_5(1UDA)
GALE_ECOLI
[Raw transfer]




NAD_A_4(1XEL)
GALE_ECOLI
[Raw transfer]




NAD_A_5(4LIS)
?
[Raw transfer]




NAD_A_4(1LRJ)
GALE_ECOLI
[Raw transfer]




GUD_B_6(3ENK)
?
[Raw transfer]




NAD_B_10(1I3L)
GALE_HUMAN
[Raw transfer]




NAD_A_3(3ENK)
?
[Raw transfer]




NAD_B_5(3ENK)
?
[Raw transfer]




NAD_B_10(1I3K)
GALE_HUMAN
[Raw transfer]




NAD_B_10(1I3K)
GALE_HUMAN
[Raw transfer]




NAD_B_5(3ENK)
?
[Raw transfer]




NAD_A_8(1I3M)
GALE_HUMAN
[Raw transfer]




NAD_A_8(1I3N)
GALE_HUMAN
[Raw transfer]




NAD_A_8(1I3K)
GALE_HUMAN
[Raw transfer]




NAD_A_3(3ENK)
?
[Raw transfer]




NAD_A_8(1I3N)
GALE_HUMAN
[Raw transfer]




NAD_B_11(4LIS)
?
[Raw transfer]




NAD_A_9(1I3L)
GALE_HUMAN
[Raw transfer]




NAD_B_10(1I3M)
GALE_HUMAN
[Raw transfer]




NAD_B_9(1HZJ)
GALE_HUMAN
[Raw transfer]




NAI_A_5(1EK6)
GALE_HUMAN
[Raw transfer]




NAD_A_4(1NAH)
GALE_ECOLI
[Raw transfer]




NAD_B_6(2UDP)
GALE_ECOLI
[Raw transfer]




NAD_A_4(2UDP)
GALE_ECOLI
[Raw transfer]




NAD_A_4(1NAI)
GALE_ECOLI
[Raw transfer]




NAD_A_4(1LRK)
GALE_ECOLI
[Raw transfer]




GUD_A_4(3ENK)
?
[Raw transfer]




GDU_B_4(1I3L)
GALE_HUMAN
[Raw transfer]




NAD_A_2(4WOK)
?
[Raw transfer]




GDU_A_3(1I3L)
GALE_HUMAN
[Raw transfer]




NAD_A_2(4TWR)
?
[Raw transfer]




EDO_A_10(1UDC)
GALE_ECOLI
[Raw transfer]




EDO_A_6(1NAH)
GALE_ECOLI
[Raw transfer]




79 HHSearch 96.7158% -95 - C1 -3ENK 12.9 ?
8 PsiBlast_PDB 96.5458%-100 - C1 -3ENK 12.9 ?
78 HHSearch 95.1358% -96 - C1 -3ENK 12.9 ?
27 PsiBlast_CBE 94.8158%-101 - C1 -3ENK 12.9 ?
58 Fugue 85.7453% -48 - C1 -1Z45 12.9 GAL10_YEAST
13 PsiBlast_PDB 83.8953% -42 - C1 -1LRJ 12.0 GALE_ECOLI
18 PsiBlast_PDB 83.7653% -40 - C1 -1XEL 12.9 GALE_ECOLI
9 PsiBlast_PDB 83.5153% -44 - C1 -1LRK 13.2 GALE_ECOLI
10 PsiBlast_PDB 83.2453% -41 - C1 -1LRL 12.4 GALE_ECOLI
28 PsiBlast_CBE 83.0253% -39 - C1 -2UDP 12.5 GALE_ECOLI
14 PsiBlast_PDB 82.9853% -40 - C1 -1NAH 12.8 GALE_ECOLI
15 PsiBlast_PDB 82.9753% -43 - C1 -1NAI 12.7 GALE_ECOLI
36 PsiBlast_CBE 82.8653% -47 - C1 -1Z45 12.9 GAL10_YEAST
33 PsiBlast_CBE 82.5252% -39 - C1 -1A9Z 12.3 GALE_ECOLI
11 PsiBlast_PDB 82.4853% -39 - C1 -2UDP 13.2 GALE_ECOLI
12 PsiBlast_PDB 82.4453% -39 - C1 -1UDC 12.8 GALE_ECOLI
20 PsiBlast_PDB 82.3452% -42 - C1 -1KVS 11.8 GALE_ECOLI
16 PsiBlast_PDB 82.2953% -37 - C1 -1UDA 13.1 GALE_ECOLI
17 PsiBlast_PDB 82.1853% -40 - C1 -1UDB 13.0 GALE_ECOLI
32 PsiBlast_CBE 82.1452% -40 - C1 -1KVT 12.2 GALE_ECOLI
71 HHSearch 82.0153% -40 * C1 *1A9Y 12.4 GALE_ECOLI
30 PsiBlast_CBE 81.7852% -41 - C1 -1KVQ 12.1 GALE_ECOLI
29 PsiBlast_CBE 81.6852% -37 - C1 -1KVU 12.4 GALE_ECOLI
19 PsiBlast_PDB 81.4952% -38 - C1 -1KVR 12.6 GALE_ECOLI
31 PsiBlast_CBE 81.3652% -41 - C1 -1A9Y 12.4 GALE_ECOLI
7 PsiBlast_PDB 80.9457% 9 - C1 -1EK6 12.8 GALE_HUMAN
24 PsiBlast_CBE 80.9057% 11 - C1 -1I3L 12.8 GALE_HUMAN
3 PsiBlast_PDB 80.7857% 8 - C1 -1I3L 12.6 GALE_HUMAN
82 HHSearch 80.6553% -33 - C1 -5GY7 13.0 GALE_ECOLI
1 PsiBlast_PDB 80.5757% 7 - C1 -1HZJ 13.0 GALE_HUMAN
34 PsiBlast_CBE 80.5652% -34 - C1 -5GY7 12.9 GALE_ECOLI
4 PsiBlast_PDB 80.4257% 8 - C1 -1I3M 12.6 GALE_HUMAN
35 PsiBlast_CBE 80.2952% -33 - C1 -5GY7 13.0 GALE_ECOLI
22 PsiBlast_CBE 79.9157% 8 - C1 -1I3N 12.5 GALE_HUMAN
5 PsiBlast_PDB 79.8957% 9 - C1 -1I3N 12.7 GALE_HUMAN
2 PsiBlast_PDB 79.7157% 8 - C1 -1I3K 12.5 GALE_HUMAN
26 PsiBlast_CBE 79.3357% 9 - C1 -1EK6 12.2 GALE_HUMAN
72 HHSearch 79.3158% 12 - C1 -1I3N 12.7 GALE_HUMAN
21 PsiBlast_CBE 79.1357% 8 - C1 -1HZJ 11.3 GALE_HUMAN
39 PsiBlast_CBE 79.0347% -25 - C1 -4LIS 11.9 ?
23 PsiBlast_CBE 78.7757% 10 - C1 -1I3M 12.7 GALE_HUMAN
25 PsiBlast_CBE 78.7057% 10 - C1 -1I3K 12.8 GALE_HUMAN
38 PsiBlast_CBE 78.5447% -25 - C1 -4LIS 12.3 ?
6 PsiBlast_PDB 78.1657% 8 - C1 -1EK5 11.1 GALE_HUMAN
37 PsiBlast_CBE 77.9547% -24 - C1 -4LIS 12.5 ?
73 HHSearch 77.3858% 13 - C1 -1I3K 12.7 GALE_HUMAN
47 PsiBlast_CBE 77.2442% -96 - C1 -4TWR 6.9 ?
46 PsiBlast_CBE 75.4042% -96 - C1 -4WOK 8.1 ?