@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1472: (2018-01-13 )
MINITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIVTPDHEDALPILRHSATHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDHTAGQISNEDLPRIEEEMQKIVKENFPSIREEVTKDEAREIFKNDPYKLELIEEHSEDEGGLTIYRQGEYVDLCRGPHVPSTGRIQIFHLLHVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQMREEAKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVNKELVSGYQHVYTPPLASVELYKTSGHWDHYQEDMFPTMDMGDGEEFVLRPMNCPHHIQVFKHHVHSYRELPIRIAEIGMMHRYEKSGALTGLQRVREMSLNDGHLFVTPEQIQEEFQRALQLIIDVYEDFNLTDYRFRLSLRDPQDTHKYFDNDEMWENAQTMLRAALDEMGVDYFEAEGEAAFYGPKLDIQIKTALGKEETLSTIQLDFLLPERFDLKYIGADGEDHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVRRYGQKETQTVSVDNFVQAILADIANKSRVEK

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TSB_B_11(4YYE)
SYTM_YEAST
[Raw transfer]




TSB_A_6(4YYE)
SYTM_YEAST
[Raw transfer]




409_A_4(4HWO)
SYT_ECOLI
[Raw transfer]




409_B_6(4HWO)
SYT_ECOLI
[Raw transfer]




TSB_A_3(3UH0)
SYTM_YEAST
[Raw transfer]




TSB_A_3(3UH0)
SYTM_YEAST
[Raw transfer]




SSA_A_5(1FYF)
SYT_ECOLI
[Raw transfer]




SSA_B_6(1FYF)
SYT_ECOLI
[Raw transfer]




1B2_A_4(4HWR)
SYT_ECOLI
[Raw transfer]




1B2_B_6(4HWR)
SYT_ECOLI
[Raw transfer]




1B3_B_6(4HWS)
SYT_ECOLI
[Raw transfer]




X16_A_4(4HWP)
SYT_ECOLI
[Raw transfer]




X16_B_6(4HWP)
SYT_ECOLI
[Raw transfer]




1B3_A_4(4HWS)
SYT_ECOLI
[Raw transfer]




THR_B_5(1EVK)
SYT_ECOLI
[Raw transfer]




2CR_A_4(4P3P)
SYT_ECOLI
[Raw transfer]




2CR_B_8(4P3P)
SYT_ECOLI
[Raw transfer]




1 PsiBlast_PDB 87.4663% -83 - C2 -1NYQ - SYT_STAAW -
2 PsiBlast_PDB 87.2863% -80 - C2 -1NYR - SYT_STAAW -
22 PsiBlast_CBE 82.8863% -81 - C2 -1NYQ - SYT_STAAW -
21 PsiBlast_CBE 82.5163% -77 - C2 -1NYR - SYT_STAAW -
69 HHSearch 79.3563% -34 - C2 -1NYQ - SYT_STAAW -
68 HHSearch 78.4263% -32 - C2 -1NYR - SYT_STAAW -
3 PsiBlast_PDB 71.3341% -14 * C1 *1QF6 - SYT_ECOLI -
34 PsiBlast_CBE 60.4240% -98 - C2 -1EVK 3.2 SYT_ECOLI
36 PsiBlast_CBE 59.8240% -92 - C2 -4P3O - SYT_ECOLI -
13 PsiBlast_PDB 59.8240% -98 - C2 -4P3P 9.0 SYT_ECOLI
31 PsiBlast_CBE 59.7040% -96 - C2 -1EVL - SYT_ECOLI -
10 PsiBlast_PDB 59.6440% -98 - C2 -4HWR 5.2 SYT_ECOLI
30 PsiBlast_CBE 59.5940% -97 - C2 -1FYF 6.4 SYT_ECOLI
4 PsiBlast_PDB 59.5340% -96 - C2 -1EVK - SYT_ECOLI -
6 PsiBlast_PDB 59.3940% -99 - C2 -1FYF 5.9 SYT_ECOLI
33 PsiBlast_CBE 59.3140% -94 - C2 -1EVL - SYT_ECOLI -
40 PsiBlast_CBE 59.2740% -95 - C2 -4HWO 6.6 SYT_ECOLI
39 PsiBlast_CBE 59.2540% -94 - C2 -4HWP 5.8 SYT_ECOLI
5 PsiBlast_PDB 59.2040% -99 - C2 -1EVL - SYT_ECOLI -
15 PsiBlast_PDB 59.1941% -80 - C2 -4P3N - SYTC_HUMAN -
38 PsiBlast_CBE 58.7540% -96 - C2 -4HWR 5.2 SYT_ECOLI
20 PsiBlast_PDB 48.0937% 10 - C2 -4YYE 6.7 SYTM_YEAST
48 PsiBlast_CBE 47.9637% 8 - C2 -4YYE 6.9 SYTM_YEAST
70 HHSearch 47.2536% 29 * C2 *3UH0 6.5 SYTM_YEAST
19 PsiBlast_PDB 46.5737% 5 - C2 -3UH0 6.5 SYTM_YEAST