@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1486: (2018-01-13 )
MKIIIQRVKKAQVSIEGQIQGKINQGLLLLVGVGPEDQEEDLDYAVRKLVNMRIFSDAEGKMNLSVKDIEGEILSISQFTLFADTKKGNRPAFTGAAKPDMASDFYDAFNQKLAQEVPVQTGIFGADMQVELVNNGPVTIILDTKKR

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

D3Y_A_3(4NBI)
?
[Raw transfer]



EPE_A_9(3LMV)
?
[Raw transfer]



EPE_C_10(3LMV)
?
[Raw transfer]



EPE_D_8(3LMV)
?
[Raw transfer]



EPE_B_7(3LMV)
?
[Raw transfer]



DHI_C_8(3KOC)
?
[Raw transfer]



DSN_D_9(3KOD)
?
[Raw transfer]



DLY_C_7(3KO7)
?
[Raw transfer]



ADP_B_8(3KO5)
?
[Raw transfer]



DHI_D_7(3KOC)
?
[Raw transfer]



ADP_C_8(3KO4)
?
[Raw transfer]



DSN_C_8(3KOD)
?
[Raw transfer]



DAR_B_7(3KO9)
?
[Raw transfer]



DGL_B_7(3KOB)
?
[Raw transfer]
86 HHSearch 96.2552%-131 - C6 -1J7G - DTD_HAEIN -
1 PsiBlast_PDB 95.8351%-131 - C6 -1J7G - DTD_HAEIN -
2 PsiBlast_PDB 95.1850%-106 - C6 -1JKE - DTD_ECOLI -
75 Fugue 94.4149%-103 - C6 -1JKE - DTD_ECOLI -
87 HHSearch 92.2349%-100 - C6 -1JKE - DTD_ECOLI -
3 PsiBlast_PDB 89.7048% -79 - C6 -2DBO - DTD_AQUAE -
85 HHSearch 89.3849% -78 - C6 -2DBO - DTD_AQUAE -
20 PsiBlast_PDB 87.0940% -70 - C6 -2OKV - DTD1_HUMAN -
90 HHSearch 86.0540% -69 - C6 -2OKV - DTD1_HUMAN -
91 HHSearch 85.0740% -72 - C6 -2OKV - DTD1_HUMAN -
88 HHSearch 76.7738% -21 - C6 -4NBI - ? -
61 PsiBlast_CBE 76.6837% -9 - C6 -3KO9 - ? -
68 PsiBlast_CBE 75.8437% -7 - C6 -3KO4 - ? -
69 PsiBlast_CBE 75.7337% -15 - C6 -3KO4 3.5 ?
26 PsiBlast_CBE 75.6337% 2 - C6 -5J61 - ? -
63 PsiBlast_CBE 75.6137% -14 - C6 -3KO7 - ? -
40 PsiBlast_CBE 75.6037% -4 - C6 -3LMV 2.3 ?
10 PsiBlast_PDB 75.5237% -1 - C6 -3KO3 - ? -
41 PsiBlast_CBE 75.4037% 1 - C6 -3LMV 2.0 ?
16 PsiBlast_PDB 75.2637% -2 - C6 -3LMV 2.2 ?
11 PsiBlast_PDB 74.9837% -15 - C6 -3KOB 3.1 ?
8 PsiBlast_PDB 74.4437% -9 - C6 -3KO9 2.3 ?
66 PsiBlast_CBE 74.0237% 4 - C6 -3KO5 3.2 ?
42 PsiBlast_CBE 73.9937% 5 - C6 -3LMV 3.0 ?
62 PsiBlast_CBE 73.9137% -2 - C6 -3KO7 2.9 ?
55 PsiBlast_CBE 71.2837% 9 - C6 -3KOD 2.9 ?