@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1494: (2018-01-13 )
MKKLGTLLVLFLSAIILVACASGKKDTTSGQKLKVVATNSIIADITKNIAGDKIDLHSIVPIGQDPHEYEPLPEDVKKTSEADLIFYNGINLETGGNAWFTKLVENAKKTENKDYFAVSDGVDVIYLEGQNEKGKEDPHAWLNLENGIIFAKNIAKQLSAKDPNNKEFYEKNLKEYTDKLDKLDKESKDKFNKIPAEKKLIVTSEGAFKYFSKAYGVPSAYIWEINTEEEGTPEQIKTLVEKLRQTKVPSLFVESSVDDRPMKTVSQDTNIPIYAQIFTDSIAEQGKEGDSYYSMMKYNLDKIAEGLAK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TRS_A_3(3ZK7)
MTSA_STRPN
[Raw transfer]




TRS_B_5(3ZK7)
MTSA_STRPN
[Raw transfer]




TRS_B_5(3ZK7)
MTSA_STRPN
[Raw transfer]




TRS_B_4(3ZK8)
MTSA_STRPN
[Raw transfer]




TRS_B_4(3ZK9)
MTSA_STRPN
[Raw transfer]




TRS_A_4(3ZKA)
MTSA_STRPN
[Raw transfer]




TRS_A_3(3ZK8)
MTSA_STRPN
[Raw transfer]




TRS_B_4(3ZK9)
MTSA_STRPN
[Raw transfer]




TRS_A_4(4UTO)
MTSA_STRPN
[Raw transfer]




TRS_A_3(3ZK9)
MTSA_STRPN
[Raw transfer]




3 PsiBlast_PDB 96.19100% -44 - C7 -1PSZ - MTSA_STRPN -
8 PsiBlast_PDB 95.3799% -67 - C7 -3ZKA - MTSA_STRPN -
27 PsiBlast_CBE 95.0299% -67 - C7 -3ZK8 3.0 MTSA_STRPN
70 HHSearch 94.85100% -66 - C7 -3ZK7 3.0 MTSA_STRPN
5 PsiBlast_PDB 94.85100% -66 - C7 -3ZK7 3.0 MTSA_STRPN
29 PsiBlast_CBE 94.8099% -62 - C7 -3ZK9 3.0 MTSA_STRPN
22 PsiBlast_CBE 94.7399% -62 - C7 -4UTO 2.9 MTSA_STRPN
26 PsiBlast_CBE 94.71100% -64 - C7 -3ZK7 3.0 MTSA_STRPN
1 PsiBlast_PDB 94.59100% -51 - C7 -4UTP - MTSA_STRPN -
28 PsiBlast_CBE 94.5799% -63 - C7 -3ZKA 3.0 MTSA_STRPN
73 HHSearch 94.54100% -64 - C7 -3ZK9 3.0 MTSA_STRPN
6 PsiBlast_PDB 94.5499% -62 - C7 -3ZK8 3.0 MTSA_STRPN
2 PsiBlast_PDB 94.3999% -62 - C7 -4UTO - MTSA_STRPN -
7 PsiBlast_PDB 94.3499% -64 - C7 -3ZK9 3.0 MTSA_STRPN
4 PsiBlast_PDB 93.34100% -47 - C7 -3ZTT - MTSA_STRPN -
9 PsiBlast_PDB 89.7179% -53 - C7 -3HH8 - MTSA_STRP1 -
57 Fugue 86.6899% 35 - C7 -1PSZ - MTSA_STRPN -
67 HHSearch 74.4529% -83 - C7 -5KZJ - ? -
68 HHSearch 74.0936% -77 - C7 -5UXS - ? -
19 PsiBlast_PDB 73.3433% -70 - C7 -5UXS - ? -