@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1497: (2018-01-13 )
MGLMAYIEMKHCYKRYQVGDTEIVANRDVNFEIEKGELVIILGASGAGKSTVLNLLGGMDTNDEGEIWIDGVNIADYSSHQRTNYRRNDVGFVFQFYNLVSNLTAKENVELASEIVTDALNSDQVLTDVGLAHRLNNFPAQLSGGEQQRVSIARAVAKNPKILLCDEPTGALDYQTGKQVLKILQDMSRQKGATVIIVTHNGALAPIADRVIQMHDASVKDVVLNQHPQDIDSLEY

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]



AGS_B_6(3C4J)
?
[Raw transfer]



ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]



ANP_J_5(3C41)
?
[Raw transfer]



AGS_A_4(3C4J)
?
[Raw transfer]



ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]



ANP_K_6(3C41)
?
[Raw transfer]



AT4_B_6(2OLK)
?
[Raw transfer]



AT4_D_8(2OLK)
?
[Raw transfer]



ADP_A_2(4U00)
?
[Raw transfer]
5 PsiBlast_PDB 89.1541% 0 - C- -5NIL - ? -
4 PsiBlast_PDB 89.1541% 0 - C- -5NIK - ? -
3 PsiBlast_PDB 76.5641% 1 - C1 -3TIF - Y796_METJA -
22 PsiBlast_CBE 75.6641% -2 - C1 -3TIF 6.4 Y796_METJA
21 PsiBlast_CBE 73.3842% -2 - C1 -1L2T 6.8 Y796_METJA
1 PsiBlast_PDB 73.1542% 4 - C1 -1L2T - Y796_METJA -
133 Fugue 72.6533% -19 - C1 -1Z47 - ? -
2 PsiBlast_PDB 71.4842% -2 - C1 -1F3O - Y796_METJA -
38 PsiBlast_CBE 68.8436% -35 - C1 -2Q0H - ? -
129 Fugue 68.8033% -17 - C1 -3TUZ - METN_ECOLI -
132 Fugue 67.6134% -16 - C1 -1OXS - ? -
62 PsiBlast_CBE 67.0431% -51 - C1 -4KI0 - MALK_ECOLI -
92 PsiBlast_CBE 66.6834% -23 - C1 -1B0U 6.2 HISP_SALTY
44 PsiBlast_CBE 65.9236% -28 - C1 -2OLK 5.7 ?
63 PsiBlast_CBE 65.8731% -51 - C1 -3RLF - MALK_ECOLI -
68 PsiBlast_CBE 65.8331% -51 - C1 -3PUY - MALK_ECOLI -
20 PsiBlast_PDB 65.6836% -33 - C1 -2OLJ - ? -
64 PsiBlast_CBE 65.5731% -49 - C1 -3RLF - MALK_ECOLI -
61 PsiBlast_CBE 65.4231% -48 - C1 -4KI0 - MALK_ECOLI -
36 PsiBlast_CBE 65.4236% -31 - C1 -3C4J 5.0 ?
17 PsiBlast_PDB 63.0739% -23 - C1 -4U00 4.3 ?