@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1499: (2018-01-13 )
MVKLVFARHGESEWNKANLFTGWADVDLSEKGTQQAIDAGKLIKEAGIEFDQAYTSVLKRAIKTTNLALEASDQLWVPVEKSWRLNERHYGGLTGKNKAEAAEQFGDEQVHIWRRSYDVLPPNMDRDDEHSAHTDRRYASLDDSVIPDAENLKVTLERALPFWEDKIAPALKDGKNVFVGAHGNSIRALVKHIKGLSDDEIMDVEIPNFPPLVFEFDEKLNVVSEYYLGK

Atome Classification :

(48 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

VO3_A_2(1E59)
GPMA_ECOLI
[Raw transfer]



DG2_A_4(2H4Z)
PMGE_HUMAN
[Raw transfer]



DG2_A_4(2H4Z)
PMGE_HUMAN
[Raw transfer]



DG2_A_3(3FDZ)
GPMA_BURP1
[Raw transfer]



BHC_H_8(1BQ4)
PMG1_YEAST
[Raw transfer]



3PG_A_5(3GP5)
GPMA_BURP1
[Raw transfer]



3PG_B_9(3GP5)
GPMA_BURP1
[Raw transfer]



DG2_B_3(2H4Z)
PMGE_HUMAN
[Raw transfer]



3PG_A_5(2F90)
PMGE_HUMAN
[Raw transfer]



3PG_B_4(2H52)
PMGE_HUMAN
[Raw transfer]



3PG_A_3(2A9J)
PMGE_HUMAN
[Raw transfer]



3PG_B_4(2A9J)
PMGE_HUMAN
[Raw transfer]



IHP_J_10(1BQ3)
PMG1_YEAST
[Raw transfer]



3PG_B_4(2H4X)
PMGE_HUMAN
[Raw transfer]



3PG_A_3(2H4X)
PMGE_HUMAN
[Raw transfer]



3PG_A_3(2H52)
PMGE_HUMAN
[Raw transfer]



3PG_B_6(2F90)
PMGE_HUMAN
[Raw transfer]



IHP_I_9(1BQ3)
PMG1_YEAST
[Raw transfer]



TLA_D_8(5UM0)
GPMA_NEIG2
[Raw transfer]



TLA_A_5(5UM0)
GPMA_NEIG2
[Raw transfer]



TLA_C_7(5UM0)
GPMA_NEIG2
[Raw transfer]



TLA_D_8(5UM0)
GPMA_NEIG2
[Raw transfer]



TLA_C_7(5UM0)
GPMA_NEIG2
[Raw transfer]



GOL_A_4(3GW8)
GPMA_BURP1
[Raw transfer]



CIT_A_4(1YFK)
PGAM1_HUMAN
[Raw transfer]



GOL_B_10(3GW8)
GPMA_BURP1
[Raw transfer]



CIT_B_5(1YFK)
PGAM1_HUMAN
[Raw transfer]



GOL_B_6(1RII)
GPMA_MYCTU
[Raw transfer]



GOL_B_6(1RII)
GPMA_MYCTU
[Raw transfer]



GOL_A_5(1RII)
GPMA_MYCTU
[Raw transfer]



GOL_A_5(1RII)
GPMA_MYCTU
[Raw transfer]



GOL_D_7(1RII)
GPMA_MYCTU
[Raw transfer]



TLA_B_6(5UM0)
GPMA_NEIG2
[Raw transfer]



3PG_J_10(1QHF)
PMG1_YEAST
[Raw transfer]



3PG_I_9(1QHF)
PMG1_YEAST
[Raw transfer]



3PG_J_10(1QHF)
PMG1_YEAST
[Raw transfer]



3PG_I_9(1QHF)
PMG1_YEAST
[Raw transfer]



EDO_A_5(4EMB)
GPMA_BORBU
[Raw transfer]



EDO_A_5(4EMB)
GPMA_BORBU
[Raw transfer]
23 PsiBlast_CBE 92.3164% -72 - C3 -5UM0 1.9 GPMA_NEIG2
1 PsiBlast_PDB 91.6564% -73 - C3 -5UM0 2.7 GPMA_NEIG2
109 HHSearch 91.0764% -68 - C3 -5UM0 2.9 GPMA_NEIG2
21 PsiBlast_CBE 91.0764% -68 - C3 -5UM0 2.9 GPMA_NEIG2
111 HHSearch 90.9956% 0 - C- -3GP3 - GPMA_BURP1 -
110 HHSearch 90.7464% -70 - C3 -5UM0 3.7 GPMA_NEIG2
22 PsiBlast_CBE 90.7464% -70 - C3 -5UM0 3.7 GPMA_NEIG2
4 PsiBlast_PDB 90.1055% 0 - C- -3GP3 - GPMA_BURP1 -
6 PsiBlast_PDB 89.5755% -79 - C3 -3GW8 3.8 GPMA_BURP1
29 PsiBlast_CBE 89.5255% -81 - C3 -3EZN - GPMA_BURP1 -
25 PsiBlast_CBE 89.2855% -79 - C3 -3GP5 4.8 GPMA_BURP1
24 PsiBlast_CBE 89.0655% -80 - C3 -3GW8 2.6 GPMA_BURP1
2 PsiBlast_PDB 88.9855% -82 - C3 -3EZN - GPMA_BURP1 -
5 PsiBlast_PDB 88.6555% -75 - C3 -3GP5 4.4 GPMA_BURP1
115 HHSearch 88.4656% -76 - C3 -3LNT - GPMA_BURP1 -
108 HHSearch 88.2253% -65 - C3 -4ODI - ? -
30 PsiBlast_CBE 88.1955% -75 - C3 -3LNT - GPMA_BURP1 -
8 PsiBlast_PDB 88.1955% -74 - C3 -3LNT - GPMA_BURP1 -
107 HHSearch 87.5953% -67 - C3 -4ODI - ? -
3 PsiBlast_PDB 87.5155% -73 - C3 -3FDZ 5.5 GPMA_BURP1
118 HHSearch 86.7150% -63 - C3 -4EMB 3.6 GPMA_BORBU
7 PsiBlast_PDB 86.3755% -60 - C3 -1E59 5.3 GPMA_ECOLI
18 PsiBlast_PDB 85.7650% -61 - C3 -4EMB 3.6 GPMA_BORBU
12 PsiBlast_PDB 84.7953% -58 - C3 -1BQ3 2.7 PMG1_YEAST
47 PsiBlast_CBE 84.3953% -56 - C3 -1BQ3 3.5 PMG1_YEAST
10 PsiBlast_PDB 84.1153% -52 - C3 -1QHF 3.7 PMG1_YEAST
34 PsiBlast_CBE 83.9153% -51 - C3 -1QHF 3.0 PMG1_YEAST
44 PsiBlast_CBE 83.5953% -59 - C3 -1BQ4 4.4 PMG1_YEAST
114 HHSearch 83.2148% -66 - C3 -1RII 2.4 GPMA_MYCTU
95 Fugue 83.0451% -47 - C3 -1QHF 3.7 PMG1_YEAST
117 HHSearch 82.7553% -43 * C3 *1QHF 3.0 PMG1_YEAST
113 HHSearch 82.7548% -65 - C3 -1RII 2.4 GPMA_MYCTU
75 PsiBlast_CBE 81.8049% -61 - C3 -1RII 2.4 GPMA_MYCTU
78 PsiBlast_CBE 81.7549% -64 - C3 -1RII 2.4 GPMA_MYCTU
77 PsiBlast_CBE 81.4249% -63 - C3 -1RII 2.4 GPMA_MYCTU
20 PsiBlast_PDB 78.0852% 0 - C3 -1YFK 3.2 PGAM1_HUMAN
64 PsiBlast_CBE 77.3252% 1 - C3 -1YFK 2.3 PGAM1_HUMAN
122 HHSearch 75.9647% -11 - C3 -2H4Z 5.3 PMGE_HUMAN
66 PsiBlast_CBE 75.6646% -5 - C3 -2H52 4.2 PMGE_HUMAN
72 PsiBlast_CBE 75.6346% -6 - C3 -2F90 5.3 PMGE_HUMAN
69 PsiBlast_CBE 75.5746% -6 - C3 -2H4X 4.0 PMGE_HUMAN
74 PsiBlast_CBE 75.5446% -9 - C3 -2A9J 4.2 PMGE_HUMAN
68 PsiBlast_CBE 75.3746% -8 - C3 -2H4Z 5.3 PMGE_HUMAN
70 PsiBlast_CBE 75.2846% -6 - C3 -2H4X 4.0 PMGE_HUMAN
67 PsiBlast_CBE 75.1146% -6 - C3 -2H4Z 5.7 PMGE_HUMAN
71 PsiBlast_CBE 74.8946% -5 - C3 -2F90 4.0 PMGE_HUMAN
65 PsiBlast_CBE 74.8946% -3 - C3 -2H52 4.0 PMGE_HUMAN
73 PsiBlast_CBE 74.8446% -3 - C3 -2A9J 4.1 PMGE_HUMAN