@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1515: (2018-01-13 )
MKQTIILLYGGRSAEREVSVLSAESVMRAVDYDRFTVKTFFISQSGDFIKTQEFSHAPGQEDRLMTNETIDWDKKVAPSAIYEEGAVVFPVLHGPMGEDGSVQGFLEVLKMPYVGCNILSSSLAMDKITTKRVLESAGIAQVPYVAIVEGDDVTAKIAEVEEKLAYPVFTKPSNMGSSVGISKSENQEELRQALKLAFRYDSRVLVEQGVNAREIEVGLLGNYDVKSTLPGEVVKDVAFYDYDAKYIDNKVTMDIPAKISDDVVAVMRQNAETAFRAIGGLGLSRCDFFYTDKGEIFLNELNTMPGFTQWSMYPLLWENMGISYPELIERLVDLAKESFDKREAHLI

Atome Classification :

(54 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PHY_A_5(1IOW)
?
[Raw transfer]



ATP_B_8(2ZDQ)
DDL_THET8
[Raw transfer]



ANP_C_6(2YZN)
DDL_THET8
[Raw transfer]



ADP_C_9(2ZDG)
DDL_THET8
[Raw transfer]



ADP_D_10(2ZDG)
DDL_THET8
[Raw transfer]



ATP_A_7(2ZDQ)
DDL_THET8
[Raw transfer]



ADP_A_6(2I8C)
DDL_STAAC
[Raw transfer]



ANP_B_5(2YZN)
DDL_THET8
[Raw transfer]



ADP_C_9(2ZDG)
DDL_THET8
[Raw transfer]



ADP_D_16(2ZDH)
DDL_THET8
[Raw transfer]



ANP_A_4(2YZN)
DDL_THET8
[Raw transfer]



ADP_C_15(2ZDH)
DDL_THET8
[Raw transfer]



ADP_B_7(2I8C)
DDL_STAAC
[Raw transfer]



ANP_A_2(4L1K)
?
[Raw transfer]



ADP_A_12(2ZDH)
DDL_THET8
[Raw transfer]



ADP_C_15(2ZDH)
DDL_THET8
[Raw transfer]



ADP_B_14(2ZDH)
DDL_THET8
[Raw transfer]



ATP_A_2(3R5F)
?
[Raw transfer]



ADP_B_8(2ZDG)
DDL_THET8
[Raw transfer]



ADP_A_2(3RFC)
?
[Raw transfer]



ADP_A_2(3RFC)
?
[Raw transfer]



AMP_C_16(5BPH)
DDL_YERPE
[Raw transfer]



AMP_B_11(5BPH)
DDL_YERPE
[Raw transfer]



ADP_A_3(4ME6)
?
[Raw transfer]



DS0_B_11(4C5A)
DDLB_ECOLI
[Raw transfer]



DS0_A_5(4C5A)
DDLB_ECOLI
[Raw transfer]



POB_A_6(1IOV)
DDLB_ECOLI
[Raw transfer]



PHY_A_5(2DLN)
DDLB_ECOLI
[Raw transfer]



PHY_A_6(1EHI)
DDL_LEUMM
[Raw transfer]



PHY_A_6(1EHI)
DDL_LEUMM
[Raw transfer]



PHY_A_5(1IOW)
DDLB_ECOLI
[Raw transfer]



PHY_A_6(1EHI)
DDL_LEUMM
[Raw transfer]



PHY_B_16(1E4E)
VANA_ENTFC
[Raw transfer]



PHY_A_4(1E4E)
VANA_ENTFC
[Raw transfer]



PHY_B_16(1E4E)
VANA_ENTFC
[Raw transfer]



PHY_A_6(1EHI)
DDL_LEUMM
[Raw transfer]



DAL_C_6(2YZM)
DDL_THET8
[Raw transfer]



DAL_B_14(4C5B)
DDLB_ECOLI
[Raw transfer]



DAL_B_5(2YZM)
DDL_THET8
[Raw transfer]



DAL_A_5(4C5B)
DDLB_ECOLI
[Raw transfer]



DAL_B_13(4C5C)
DDLB_ECOLI
[Raw transfer]



DAL_D_21(5C1P)
DDL_YERPE
[Raw transfer]



DAL_A_5(4C5C)
DDLB_ECOLI
[Raw transfer]



DAL_A_4(2YZM)
DDL_THET8
[Raw transfer]



G1L_B_4(2I80)
DDL_STAAC
[Raw transfer]



EDO_A_4(4EG0)
DDL_BURA4
[Raw transfer]



G1L_B_4(2I80)
DDL_STAAC
[Raw transfer]



EDO_B_5(4EG0)
DDL_BURA4
[Raw transfer]
1 PsiBlast_PDB 87.5573% -37 - C1 -3K3P - DDL_STRMU -
105 HHSearch 85.9272% -28 - C1 -3K3P - DDL_STRMU -
3 PsiBlast_PDB 74.0446% 5 - C1 -2I87 - DDL_STAAC -
21 PsiBlast_CBE 73.9246% 3 - C1 -2I80 6.1 DDL_STAAC
95 HHSearch 73.0248% 2 - C1 -2I87 - DDL_STAAC -
2 PsiBlast_PDB 72.5746% 3 - C1 -2I80 - DDL_STAAC -
100 HHSearch 72.3847% 0 - C1 -2I80 6.1 DDL_STAAC
22 PsiBlast_CBE 72.3546% 6 - C1 -2I8C 4.6 DDL_STAAC
27 PsiBlast_CBE 72.2441% -45 - C1 -2ZDQ 8.3 DDL_THET8
11 PsiBlast_PDB 72.0141% -45 - C1 -2ZDQ 8.7 DDL_THET8
7 PsiBlast_PDB 71.8441% -49 - C1 -2YZM 3.7 DDL_THET8
4 PsiBlast_PDB 71.6946% 6 - C1 -2I8C 5.3 DDL_STAAC
13 PsiBlast_PDB 71.4840% -48 - C1 -2YZG - DDL_THET8 -
12 PsiBlast_PDB 71.1441% -48 - C1 -2FB9 - DDL_THET8 -
28 PsiBlast_CBE 71.1341% -46 - C1 -2ZDH 6.0 DDL_THET8
9 PsiBlast_PDB 71.1141% -50 - C1 -2ZDG - DDL_THET8 -
93 HHSearch 70.8538% -30 - C- -3E5N - ? -
10 PsiBlast_PDB 70.7841% -44 - C1 -2ZDH 6.6 DDL_THET8
30 PsiBlast_CBE 70.3141% -51 - C1 -2ZDH 6.2 DDL_THET8
32 PsiBlast_CBE 70.1841% -42 - C1 -2ZDG 6.7 DDL_THET8
97 HHSearch 69.9038% -23 - C1 -3RFC 5.2 ?
8 PsiBlast_PDB 69.8541% -55 - C1 -2YZN 5.1 DDL_THET8
29 PsiBlast_CBE 69.4141% -50 - C1 -2ZDH 6.0 DDL_THET8
36 PsiBlast_CBE 69.3741% -49 - C1 -2YZM 3.8 DDL_THET8
34 PsiBlast_CBE 69.1741% -50 - C1 -2YZN 4.7 DDL_THET8
104 HHSearch 69.0242% -60 - C1 -2ZDG 7.5 DDL_THET8
15 PsiBlast_PDB 67.7839% -29 - C1 -3R5F 7.0 ?
103 HHSearch 67.4742% -66 - C1 -2ZDH 6.7 DDL_THET8
33 PsiBlast_CBE 67.1141% -52 - C1 -2ZDG 5.3 DDL_THET8
37 PsiBlast_CBE 66.9241% -53 - C1 -2YZM 3.4 DDL_THET8
14 PsiBlast_PDB 66.3339% -28 - C1 -3RFC 5.2 ?
16 PsiBlast_PDB 66.2039% -26 - C1 -4L1K 6.3 ?
35 PsiBlast_CBE 66.0841% -49 - C1 -2YZN 5.4 DDL_THET8
18 PsiBlast_PDB 65.1239% -25 - C1 -4ME6 4.9 ?
31 PsiBlast_CBE 63.5041% -48 - C1 -2ZDG 5.6 DDL_THET8
45 PsiBlast_CBE 62.3333% 30 - C1 -1EHI 3.4 DDL_LEUMM
46 PsiBlast_CBE 62.3035% -13 - C1 -1E4E 5.0 VANA_ENTFC
91 HHSearch 62.2233% 25 - C1 -1EHI 3.4 DDL_LEUMM
50 PsiBlast_CBE 60.9034% -14 - C1 -5C1P 3.7 DDL_YERPE
73 PsiBlast_CBE 59.5531% 2 - C1 -4C5C 2.3 DDLB_ECOLI
78 PsiBlast_CBE 59.1031% 0 - C1 -1IOW 4.0 DDLB_ECOLI
76 PsiBlast_CBE 59.0431% 4 - C1 -4C5A 3.2 DDLB_ECOLI
47 PsiBlast_CBE 58.8935% -13 - C1 -1E4E 5.0 VANA_ENTFC
80 PsiBlast_CBE 58.8231% -10 - C1 -4EG0 3.4 DDL_BURA4
74 PsiBlast_CBE 58.6931% 6 - C1 -4C5B 2.8 DDLB_ECOLI
75 PsiBlast_CBE 58.6431% 2 - C1 -4C5B 3.0 DDLB_ECOLI
72 PsiBlast_CBE 58.6231% 3 - C1 -4C5C 2.8 DDLB_ECOLI
81 Fugue 58.3132% 23 - C1 -1EHI 3.4 DDL_LEUMM
92 HHSearch 57.9633% 6 - C1 -1E4E 5.0 VANA_ENTFC
77 PsiBlast_CBE 57.7131% 6 - C1 -4C5A 3.2 DDLB_ECOLI
71 PsiBlast_CBE 56.9231% 3 - C1 -1IOV 4.2 DDLB_ECOLI
70 PsiBlast_CBE 55.2931% -0 - C1 -2DLN 4.3 DDLB_ECOLI
86 Fugue 33.9536%-124 - C1 -1IOW Error ?
83 Fugue 29.3935% 55 - C1 -1EHI 3.1 DDL_LEUMM