@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1577: (2018-01-15 )
MIQIGKIFAGRYRIVKQIGRGGMADVYLAKDLILDGEEVAVKVLRTNYQTDPIAVARFQREARAMADLDHPHIVRITDIGEEDGQQYLAMEYVAGLDLKRYIKEHYPLSNEEAVRIMGQILLAMRLAHTRGIVHRDLKPQNILLTPDGTAKVTDFGIAVAFAETSLTQTNSMLGSVHYLSPEQARGSKATVQSDIYAMGIIFYEMLTGHIPYDGDSAVTIALQHFQNPLPSVIAENSSVPQALENVIIKATAKKLTNRYRSVSEMYVDLSSSLSYNRRNESKLIFDETSKADTKTLPKVSQSTLTSIPKVQAQTEHKSIKNPSQAVTEETYQPQAPKKHRFKMRYLILLASLVLVAASLIWILSRTPATIAIPDVAGQTVAEAKATLKKANFEIGEEKTEASEKVEEGRIIRTDPGAGTGRKEGTKINLVVSSGKQSFQISNYVGRKSSDVIAELKEKKVPDNLIKIEEEESNESEAGTVLKQSLPEGTTYDLSKATQIVLTVAKKATTIQLGNYIGRNSTEVISELKQKKVPENLIKIEEEESSESEPGTIMKQSPGAGTTYDVSKPTQIVLTVAKKVTSVAMPSYIGSSLEFTKNNLIQIVGIKEANIEVVEVTTAPAGSVEGMVVEQSPRAGEKVDLNKTRVKISIYKPKTTSATP

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACP_A_2(1O6Y)
PKNB_MYCTU
[Raw transfer]




ANP_A_2(4BL1)
MELK_HUMAN
[Raw transfer]




ADP_A_2(3F61)
PKNB_MYCTU
[Raw transfer]




AGS_A_2(3ORK)
?
[Raw transfer]




AGS_A_2(3ORK)
?
[Raw transfer]




AGS_A_2(3ORM)
?
[Raw transfer]




AGS_A_2(3ORP)
?
[Raw transfer]




AGS_A_2(3ORT)
?
[Raw transfer]




OT5_A_2(4CQG)
MELK_MOUSE
[Raw transfer]




GOL_A_12(3IGO)
?
[Raw transfer]




6Z5_B_4(5KZ8)
?
[Raw transfer]




6Z5_A_3(5KZ8)
?
[Raw transfer]




5RC_A_2(5ES1)
MARK4_HUMAN
[Raw transfer]




24R_A_3(5EAK)
MARK2_HUMAN
[Raw transfer]




24R_B_4(5EAK)
MARK2_HUMAN
[Raw transfer]




EDO_A_5(2WEL)
KCC2D_HUMAN
[Raw transfer]




EDO_A_4(2WEL)
KCC2D_HUMAN
[Raw transfer]




22 PsiBlast_CBE 87.9347% -94 - C2 -4EQM - ? -
23 PsiBlast_CBE 87.7747% -95 - C2 -4EQM - ? -
25 PsiBlast_CBE 87.1647% -93 - C2 -4EQM - ? -
21 PsiBlast_CBE 87.1247% -94 - C2 -4EQM - ? -
24 PsiBlast_CBE 86.9247% -92 - C2 -4EQM - ? -
122 HHSearch 86.0847% -95 - C2 -4EQM - ? -
1 PsiBlast_PDB 85.6047% -90 - C2 -4EQM - ? -
128 HHSearch 76.0839% -31 - C2 -3ORK 5.0 ?
2 PsiBlast_PDB 75.4741% -18 - C2 -3ORK 5.0 ?
3 PsiBlast_PDB 75.2841% -12 - C2 -3ORO - PKNB_MYCTU -
4 PsiBlast_PDB 75.1441% -16 - C2 -3ORP 7.0 ?
7 PsiBlast_PDB 74.8441% -9 - C2 -2FUM - PKNB_MYCTU -
8 PsiBlast_PDB 74.4940% -18 - C2 -3F61 5.5 PKNB_MYCTU
5 PsiBlast_PDB 73.9541% -12 - C2 -3ORT 7.2 ?
6 PsiBlast_PDB 73.5641% -16 - C2 -1O6Y 5.5 PKNB_MYCTU
9 PsiBlast_PDB 70.0840% -26 - C2 -3ORM 6.8 ?
18 PsiBlast_PDB 66.4136%-109 - C2 -3IEC - MARK2_HUMAN -
115 HHSearch 65.2929% -72 - C2 -2WEL 2.8 KCC2D_HUMAN
13 PsiBlast_PDB 64.5236% -99 - C- -3FE3 - MARK3_HUMAN -
11 PsiBlast_PDB 64.3636%-100 - C2 -2QNJ - MARK3_HUMAN -