@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1634: (2018-01-16 )
MSQEFLARILEQKAREVEQMKLEQIQPLRQTYRLAEFLKNHQDCLQVIAEVKKASPSLGDINLDVDIVQQAQTYEENGAVMISVLTDEVFFKGHLDYLREISSQVEIPTLNKDFIIDEKQIIRARNAGATVILLIVAALSEERLKELYDYATELGLEVLVETHNLAELEVAHRLGAEIIGVNNRNLTTFEVDLQTSVDLAPYFEEGRYYISESAIFTGQDAERLAPYFNGILVGTALMQAENVVQRIKELQIDKG

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

137_B_2(1LBF)
TRPC_SULSO
[Raw transfer]




137_P_8(1JCM)
TRPC_ECOLI
[Raw transfer]




137_P_8(1JCM)
TRPC_ECOLI
[Raw transfer]




IGP_A_2(3T44)
TRPC_MYCTU
[Raw transfer]




4RG_A_2(3T55)
TRPC_MYCTU
[Raw transfer]




BE2_A_3(3T44)
TRPC_MYCTU
[Raw transfer]




UNL_B_6(3TSM)
TRPC_BRUA2
[Raw transfer]




UNL_B_6(3TSM)
TRPC_BRUA2
[Raw transfer]




5RG_A_2(3T78)
TRPC_MYCTU
[Raw transfer]




MES_B_2(1JUL)
TRPC_SULSO
[Raw transfer]




ACY_B_14(1VC4)
?
[Raw transfer]




IGP_B_2(1A53)
TRPC_SULSO
[Raw transfer]




IGP_B_2(1A53)
TRPC_SULSO
[Raw transfer]




ACY_B_14(1VC4)
?
[Raw transfer]




2 PsiBlast_PDB 83.4936% -82 - C6 -1I4N - TRPC_THEMA -
1 PsiBlast_PDB 80.9342%-102 - C6 -3TSM - TRPC_BRUA2 -
21 PsiBlast_CBE 80.0242% -99 - C6 -3TSM 2.8 TRPC_BRUA2
15 PsiBlast_PDB 79.9836%-114 - C6 -1A53 6.3 TRPC_SULSO
13 PsiBlast_PDB 79.8636%-112 - C6 -1LBF 7.6 TRPC_SULSO
23 PsiBlast_CBE 79.2237% -36 - C6 -1VC4 3.1 ?
14 PsiBlast_PDB 78.9336%-113 - C6 -1LBL - TRPC_SULSO -
10 PsiBlast_PDB 78.7736%-111 - C6 -1IGS - TRPC_SULSO -
19 PsiBlast_PDB 78.6034%-122 - C6 -4IX0 - TRPC_SULSO -
9 PsiBlast_PDB 78.4537%-108 - C6 -3T78 3.2 TRPC_MYCTU
8 PsiBlast_PDB 78.3837%-109 - C6 -3T55 5.6 TRPC_MYCTU
12 PsiBlast_PDB 78.3536%-109 - C6 -1JUL 2.1 TRPC_SULSO
65 HHSearch 78.2137% -2 - C6 -1JCM 7.7 TRPC_ECOLI
4 PsiBlast_PDB 77.9637% -39 - C6 -1VC4 - ? -
17 PsiBlast_PDB 77.7837%-117 - C6 -4FB7 - TRPC_MYCTU -
32 PsiBlast_CBE 77.4733%-127 - C6 -3UXD - ? -
63 HHSearch 77.2438% 6 - C6 -1PII - TRPC_ECOLI -
18 PsiBlast_PDB 77.2034%-117 - C6 -4IWW - TRPC_SULSO -
35 PsiBlast_CBE 77.1431%-140 - C6 -3UZJ - ? -
11 PsiBlast_PDB 77.0936%-107 - C6 -1JUK - TRPC_SULSO -
7 PsiBlast_PDB 77.0737%-104 - C6 -3T44 6.5 TRPC_MYCTU
61 HHSearch 75.9038% -2 - C6 -3TSM 2.8 TRPC_BRUA2
64 HHSearch 74.7538% 32 - C6 -1VC4 3.1 ?
5 PsiBlast_PDB 74.6038% -0 - C6 -1JCM 7.7 TRPC_ECOLI
67 HHSearch 69.9033% 16 - C6 -1A53 6.3 TRPC_SULSO