@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1635: (2018-01-16 )
MKEIIEKLAKFENLSGVEMTDVIERIVTGRVTEAQIASLLLALKMKGETPEERTAIAQVMRGHAQHIPTEIHDAMDNCGTGGDKSFSFNISTTAAFVLAGGGIHMAKHGNRSISSKSGSADVLEALGINLDLKPAELGKVFDKTGIVFLFAKNMHPAMKYIMPARLELGIPTIMNLTGPLIHPMALETQLLGISRPELLESTAQVLKNMGRKRAIVVAGPEGLDEAGLNGTTKIALLENGEISLSSFTPEDLGMEGYAMEDIRGGNAQENAEILLSVLKNEASPFLETTVLNAGLGFYANGKIDSIKEGVALARQVIARGKALEKLRLLQEYQK

Atome Classification :

(72 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

6M1_A_5(4N93)
TRPD_MYCTU
[Raw transfer]




6M1_B_13(4N93)
TRPD_MYCTU
[Raw transfer]




PRP_B_9(3QQS)
TRPD_MYCTU
[Raw transfer]




PRP_B_8(3R6C)
TRPD_MYCTU
[Raw transfer]




PRP_B_6(5BYT)
TRPD_MYCTU
[Raw transfer]




PRP_A_3(3R88)
TRPD_MYCTU
[Raw transfer]




6F0_B_14(4OWO)
TRPD_MYCTU
[Raw transfer]




6F0_A_7(4OWO)
TRPD_MYCTU
[Raw transfer]




PRP_A_5(5C7S)
TRPD_MYCTU
[Raw transfer]




PRP_A_5(4OWM)
TRPD_MYCTU
[Raw transfer]




PRP_A_3(3QSA)
TRPD_MYCTU
[Raw transfer]




PRP_A_3(4N5V)
TRPD_MYCTU
[Raw transfer]




PRP_A_5(4OWU)
TRPD_MYCTU
[Raw transfer]




PRP_A_7(4N93)
TRPD_MYCTU
[Raw transfer]




PRP_A_3(3R6C)
TRPD_MYCTU
[Raw transfer]




PRP_B_12(4OWO)
TRPD_MYCTU
[Raw transfer]




PRP_B_8(5C7S)
TRPD_MYCTU
[Raw transfer]




PRP_A_4(5BYT)
TRPD_MYCTU
[Raw transfer]




PRP_B_7(3QSA)
TRPD_MYCTU
[Raw transfer]




PRP_B_7(3R88)
TRPD_MYCTU
[Raw transfer]




PRP_C_13(3QQS)
TRPD_MYCTU
[Raw transfer]




PRP_A_5(4ZOF)
TRPD_MYCTA
[Raw transfer]




FA0_B_14(4N5V)
TRPD_MYCTU
[Raw transfer]




FA0_A_6(4N5V)
TRPD_MYCTU
[Raw transfer]




PRP_A_5(4ZOK)
TRPD_MYCTA
[Raw transfer]




GOL_C_11(2ELC)
TRPD_THET8
[Raw transfer]




PRP_C_14(3UU1)
TRPD_MYCTU
[Raw transfer]




PRP_A_5(3QQS)
TRPD_MYCTU
[Raw transfer]




PRP_B_9(4ZOK)
TRPD_MYCTA
[Raw transfer]




PRP_B_9(4N93)
TRPD_MYCTU
[Raw transfer]




PRP_B_10(4N5V)
TRPD_MYCTU
[Raw transfer]




PRP_B_10(4ZOF)
TRPD_MYCTA
[Raw transfer]




PRP_A_5(4ZOJ)
TRPD_MYCTA
[Raw transfer]




PRP_B_12(4GIU)
TRPD_MYCTU
[Raw transfer]




PRP_A_3(4X5C)
TRPD_MYCTU
[Raw transfer]




5RG_B_14(4OWN)
TRPD_MYCTU
[Raw transfer]




PRP_A_5(4OWO)
TRPD_MYCTU
[Raw transfer]




GOL_A_9(2ELC)
TRPD_THET8
[Raw transfer]




PRP_B_4(4X5B)
TRPD_MYCTU
[Raw transfer]




PRP_B_11(4GKM)
TRPD_MYCTU
[Raw transfer]




PRP_B_10(4OWM)
TRPD_MYCTU
[Raw transfer]




BE2_A_2(4YI7)
TRPD_ACIAD
[Raw transfer]




PRP_A_3(4GIU)
TRPD_MYCTU
[Raw transfer]




PRP_B_10(4ZOJ)
TRPD_MYCTA
[Raw transfer]




BE2_A_2(4YI7)
TRPD_ACIAD
[Raw transfer]




PRP_B_12(4OWU)
TRPD_MYCTU
[Raw transfer]




51N_B_9(5C1R)
TRPD_MYCTU
[Raw transfer]




PRP_A_3(4GKM)
TRPD_MYCTU
[Raw transfer]




644_B_7(4M0R)
TRPD_MYCTU
[Raw transfer]




PRP_A_5(4OWQ)
TRPD_MYCTU
[Raw transfer]




PRP_A_7(4X58)
TRPD_MYCTU
[Raw transfer]




PRP_A_3(4GIU)
TRPD_MYCTU
[Raw transfer]




51N_A_5(5C1R)
TRPD_MYCTU
[Raw transfer]




PRP_A_3(4X5B)
TRPD_MYCTU
[Raw transfer]




PRP_B_12(4OWN)
TRPD_MYCTU
[Raw transfer]




PRP_B_6(4X59)
TRPD_MYCTU
[Raw transfer]




GOL_A_4(4IJ1)
TRPD_MYCTU
[Raw transfer]




14B_C_18(3UU1)
TRPD_MYCTU
[Raw transfer]




PRP_A_3(4X59)
TRPD_MYCTU
[Raw transfer]




PRP_B_6(3GBR)
TRPD_SULSO
[Raw transfer]




POP_B_6(4X5C)
TRPD_MYCTU
[Raw transfer]




POP_A_3(4OWS)
TRPD_MYCTU
[Raw transfer]




IMD_B_9(5BO2)
TRPD_MYCTA
[Raw transfer]




IMD_B_8(5BNE)
TRPD_MYCTU
[Raw transfer]




106 HHSearch 91.5141% -97 - C6 -2ELC - TRPD_THET8 -
105 HHSearch 89.9137% -96 - C6 -1KHD - ? -
22 PsiBlast_CBE 89.2042%-100 - C6 -2ELC - TRPD_THET8 -
99 PsiBlast_CBE 88.9332%-112 - C6 -3GBR 3.4 TRPD_SULSO
5 PsiBlast_PDB 88.5842% -93 - C6 -1V8G - TRPD_THETH -
109 HHSearch 88.4433%-109 - C6 -1O17 - TRPD_SULSO -
104 HHSearch 88.2437% -85 - C6 -1KGZ - ? -
23 PsiBlast_CBE 88.0842% -97 - C6 -2ELC 2.3 TRPD_THET8
7 PsiBlast_PDB 88.0133%-116 - C6 -1O17 - TRPD_SULSO -
10 PsiBlast_PDB 87.9333%-107 - C6 -1ZYK - TRPD_SULSO -
6 PsiBlast_PDB 87.8642% -96 - C6 -2ELC 2.5 TRPD_THET8
26 PsiBlast_CBE 87.7033%-114 - C6 -2GVQ - TRPD_SULSO -
25 PsiBlast_CBE 87.6933%-108 - C6 -2GVQ - TRPD_SULSO -
30 PsiBlast_CBE 87.4633%-105 - C6 -1ZYK - TRPD_SULSO -
11 PsiBlast_PDB 87.4333%-111 - C6 -2GVQ - TRPD_SULSO -
3 PsiBlast_PDB 87.3636% -97 - C6 -1KHD - ? -
8 PsiBlast_PDB 87.1933%-112 - C6 -1GXB - TRPD_SULSO -
24 PsiBlast_CBE 87.1642% -97 - C6 -2ELC - TRPD_THET8 -
9 PsiBlast_PDB 86.9733%-105 - C6 -1ZXY - TRPD_SULSO -
29 PsiBlast_CBE 86.8833%-105 - C6 -1ZYK - TRPD_SULSO -
1 PsiBlast_PDB 82.8640% -17 - C6 -4YI7 3.9 TRPD_ACIAD
101 HHSearch 81.8440% -19 - C6 -4YI7 3.9 TRPD_ACIAD
110 HHSearch 78.1834% -21 - C6 -4GIU 6.9 TRPD_MYCTU
65 PsiBlast_CBE 71.9534% -20 - C6 -4OWM 5.2 TRPD_MYCTU
61 PsiBlast_CBE 71.9534% -17 - C6 -4OWQ 6.1 TRPD_MYCTU
58 PsiBlast_CBE 71.8534% -20 - C6 -4OWU 6.8 TRPD_MYCTU
14 PsiBlast_PDB 71.4834% -14 - C6 -4N93 6.4 TRPD_MYCTU
39 PsiBlast_CBE 71.4034% -20 - C6 -4N5V 6.6 TRPD_MYCTU
62 PsiBlast_CBE 71.2934% -19 - C6 -4OWO 7.0 TRPD_MYCTU
66 PsiBlast_CBE 71.2334% -15 - C6 -4OWM 6.0 TRPD_MYCTU
17 PsiBlast_PDB 71.2034% -17 - C6 -4ZOF 7.1 TRPD_MYCTA
55 PsiBlast_CBE 71.0534% -19 - C6 -4X59 4.4 TRPD_MYCTU
64 PsiBlast_CBE 71.0434% -19 - C6 -4OWN 4.3 TRPD_MYCTU
63 PsiBlast_CBE 71.0334% -17 - C6 -4OWO 6.5 TRPD_MYCTU
67 PsiBlast_CBE 70.9034% -16 - C6 -4GIU 7.0 TRPD_MYCTU
79 PsiBlast_CBE 70.8734% -17 - C6 -3QSA 6.4 TRPD_MYCTU
88 PsiBlast_CBE 70.8634% -16 - C6 -3QQS 5.9 TRPD_MYCTU
77 PsiBlast_CBE 70.8334% -18 - C6 -3R6C 6.5 TRPD_MYCTU
68 PsiBlast_CBE 70.7934% -19 - C6 -4GIU 6.9 TRPD_MYCTU
89 PsiBlast_CBE 70.7534% -15 - C6 -3QQS 5.8 TRPD_MYCTU
60 PsiBlast_CBE 70.7034% -26 - C6 -4OWS 4.3 TRPD_MYCTU
80 PsiBlast_CBE 70.6934% -15 - C6 -3QSA 6.7 TRPD_MYCTU
41 PsiBlast_CBE 70.6934% -16 - C6 -5C7S 6.0 TRPD_MYCTU
37 PsiBlast_CBE 70.6234% -19 - C6 -4N93 6.8 TRPD_MYCTU
19 PsiBlast_PDB 70.6134% -16 - C6 -4ZOK 5.6 TRPD_MYCTA
12 PsiBlast_PDB 70.5434% -16 - C6 -4N5V 6.9 TRPD_MYCTU
42 PsiBlast_CBE 70.4934% -17 - C6 -5C1R 6.1 TRPD_MYCTU
59 PsiBlast_CBE 70.4134% -17 - C6 -4OWU 6.6 TRPD_MYCTU
43 PsiBlast_CBE 70.3734% -20 - C6 -5C1R 6.1 TRPD_MYCTU
98 PsiBlast_CBE 70.1434% -17 - C6 -4X5B 1.0 TRPD_MYCTU
76 PsiBlast_CBE 70.1134% -16 - C6 -3R88 6.3 TRPD_MYCTU
97 PsiBlast_CBE 70.0634% -20 - C6 -4X5B 5.1 TRPD_MYCTU
75 PsiBlast_CBE 70.0434% -21 - C6 -3R88 7.0 TRPD_MYCTU
90 PsiBlast_CBE 70.0134% -19 - C6 -4X58 6.3 TRPD_MYCTU
78 PsiBlast_CBE 69.9034% -17 - C6 -3R6C 6.4 TRPD_MYCTU
44 PsiBlast_CBE 69.8934% -19 - C6 -5BYT 5.5 TRPD_MYCTU
48 PsiBlast_CBE 69.8134% -34 - C6 -5BNE 3.7 TRPD_MYCTU
87 PsiBlast_CBE 69.7734% -18 - C6 -3QQS 4.0 TRPD_MYCTU
51 PsiBlast_CBE 69.7434% -16 - C6 -4ZOF 6.9 TRPD_MYCTA
96 PsiBlast_CBE 69.4734% -19 * C6 *4X5C 5.8 TRPD_MYCTU
70 PsiBlast_CBE 69.4434% -21 - C6 -3UU1 5.5 TRPD_MYCTU
45 PsiBlast_CBE 69.3734% -17 - C6 -5BYT 6.6 TRPD_MYCTU
15 PsiBlast_PDB 69.2234% -17 - C6 -4GKM 6.4 TRPD_MYCTU
47 PsiBlast_CBE 69.1834% -27 - C6 -5BO2 2.6 TRPD_MYCTA
54 PsiBlast_CBE 69.1734% -15 - C6 -4GKM 6.4 TRPD_MYCTU
53 PsiBlast_CBE 68.8234% -26 - C6 -4IJ1 2.1 TRPD_MYCTU
50 PsiBlast_CBE 68.7734% -17 - C6 -4ZOJ 5.3 TRPD_MYCTA
49 PsiBlast_CBE 68.6634% -20 - C6 -4ZOK 4.7 TRPD_MYCTA
56 PsiBlast_CBE 68.5134% -18 - C6 -4X59 3.8 TRPD_MYCTU
18 PsiBlast_PDB 68.2534% -18 - C6 -4ZOJ 6.4 TRPD_MYCTA
40 PsiBlast_CBE 67.7234% -19 - C6 -5C7S 5.9 TRPD_MYCTU
95 PsiBlast_CBE 67.1534% -23 - C6 -4X5C 3.9 TRPD_MYCTU