@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1660: (2018-01-16 )
MKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKKHVEILEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAPSTMDLEGRIITLEFDAFFVTQVYTPNAGDGLKRLEERQVWDAKYAEYLAELDKEKPVLATGDYNVAHNEIDLANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHVHGDVPERYTWWAQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQDHTPIVLEIDL

Atome Classification :

(41 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NACID_H_6(4IEM)
APEX1_HUMAN
[Raw transfer]

-

BCN_A_3(2JC5)
?
[Raw transfer]




NACID_V_5(1DE9)
APEX1_HUMAN
[Raw transfer]

-

NACID_I_7(4IEM)
APEX1_HUMAN
[Raw transfer]

-

NACID_P_3(5DFI)
APEX1_HUMAN
[Raw transfer]

-

PEG_A_10(3W2Y)
?
[Raw transfer]




FMT_A_13(3W2Y)
?
[Raw transfer]




NACID_P_3(5DG0)
APEX1_HUMAN
[Raw transfer]

-

EDO_A_2(4QHD)
APEX1_HUMAN
[Raw transfer]




NACID_O_15(4IEM)
APEX1_HUMAN
[Raw transfer]

-

PEG_A_5(5CFE)
EXOA_BACSU
[Raw transfer]




GOL_B_23(3GA6)
?
[Raw transfer]




GOL_A_7(3G00)
?
[Raw transfer]




PEG_A_5(5CFE)
EXOA_BACSU
[Raw transfer]




PG4_A_3(5J8N)
?
[Raw transfer]




NACID_F_3(4IEM)
APEX1_HUMAN
[Raw transfer]

-

FMT_A_5(3W2X)
?
[Raw transfer]




NACID_H_5(3G2D)
?
[Raw transfer]

-

NACID_H_3(3G4T)
?
[Raw transfer]

-

NACID_X_1(1DE8)
APEX1_HUMAN
[Raw transfer]

-

NACID_H_3(3G00)
?
[Raw transfer]

-

NACID_U_3(1DE8)
APEX1_HUMAN
[Raw transfer]

-

NACID_X_1(1DEW)
APEX1_HUMAN
[Raw transfer]

-

NACID_U_3(1DE8)
APEX1_HUMAN
[Raw transfer]

-

NACID_U_3(1DEW)
APEX1_HUMAN
[Raw transfer]

-

NACID_Y_2(1DE9)
APEX1_HUMAN
[Raw transfer]

-

NACID_H_3(3G3C)
?
[Raw transfer]

-

FMT_A_5(3W2Y)
?
[Raw transfer]




NACID_P_4(5DFF)
APEX1_HUMAN
[Raw transfer]

-

EDO_A_8(4QHE)
APEX1_HUMAN
[Raw transfer]




NACID_I_4(3G4T)
?
[Raw transfer]

-

NACID_I_4(3G3C)
?
[Raw transfer]

-

NACID_X_1(1DE9)
APEX1_HUMAN
[Raw transfer]

-

NACID_G_3(3G2D)
?
[Raw transfer]

-

MPD_B_12(3G00)
?
[Raw transfer]




79 HHSearch 96.1942% -94 - C2 -5CFE 2.2 EXOA_BACSU
1 PsiBlast_PDB 94.4439% -88 - C2 -5CFE 2.2 EXOA_BACSU
78 HHSearch 91.5938% -67 - C2 -5DFF - APEX1_HUMAN -
73 HHSearch 90.6539% -59 - C2 -4QHE - APEX1_HUMAN -
74 HHSearch 90.5939% -67 * C2 *1DE8 5.2 APEX1_HUMAN
15 PsiBlast_PDB 89.8637% -63 - C2 -3U8U - APEX1_HUMAN -
17 PsiBlast_PDB 89.8437% -59 - C2 -4IEM 6.3 APEX1_HUMAN
5 PsiBlast_PDB 89.5637% -59 - C2 -1BIX - APEX1_HUMAN -
19 PsiBlast_PDB 89.2237% -57 - C2 -4QHD 2.3 APEX1_HUMAN
13 PsiBlast_PDB 89.1137% -60 - C2 -1E9N - APEX1_HUMAN -
38 PsiBlast_CBE 88.7737% -56 - C2 -4IEM Error APEX1_HUMAN
9 PsiBlast_PDB 88.7237% -20 - C2 -5DFH - APEX1_HUMAN -
18 PsiBlast_PDB 88.3937% -56 - C2 -4QH9 - APEX1_HUMAN -
20 PsiBlast_PDB 88.3637% -54 - C2 -4QHE 3.0 APEX1_HUMAN
82 HHSearch 88.2734% -88 - C2 -5EWT - ? -
4 PsiBlast_PDB 88.1337% -56 - C2 -4LND - APEX1_HUMAN -
80 HHSearch 87.9734% -50 - C2 -3G91 - ? -
30 PsiBlast_CBE 87.9337% -19 - C2 -5DFF - APEX1_HUMAN -
44 PsiBlast_CBE 87.9137% -19 - C2 -5DFJ - APEX1_HUMAN -
37 PsiBlast_CBE 87.8837% -56 - C2 -4IEM 4.3 APEX1_HUMAN
39 PsiBlast_CBE 87.6937% -56 - C2 -4IEM 5.1 APEX1_HUMAN
11 PsiBlast_PDB 87.6637% -18 - C2 -5DG0 7.6 APEX1_HUMAN
6 PsiBlast_PDB 87.5337% -18 - C2 -1DE8 7.2 APEX1_HUMAN
10 PsiBlast_PDB 87.1337% -15 - C2 -5DFI 8.0 APEX1_HUMAN
72 HHSearch 87.0132% -61 - C2 -5J8N 1.8 ?
23 PsiBlast_CBE 86.8637% -14 - C2 -1DEW 7.4 APEX1_HUMAN
3 PsiBlast_PDB 86.6337% -14 - C2 -1DEW 5.3 APEX1_HUMAN
8 PsiBlast_PDB 86.3137% -17 - C2 -5DFF 2.4 APEX1_HUMAN
26 PsiBlast_CBE 86.1737% -11 - C2 -1DE9 6.2 APEX1_HUMAN
27 PsiBlast_CBE 85.9637% -13 - C2 -1DE8 4.9 APEX1_HUMAN
7 PsiBlast_PDB 84.5837% -11 - C2 -1DE9 6.2 APEX1_HUMAN
46 PsiBlast_CBE 82.1335% 18 - C2 -3W2Y 2.8 ?
45 PsiBlast_CBE 81.8535% 13 - C2 -3W2X 3.1 ?
47 PsiBlast_CBE 81.3635% 17 - C2 -3W2Y 3.6 ?
69 PsiBlast_CBE 79.4434% 20 - C2 -3G00 2.9 ?
54 PsiBlast_CBE 79.4034% 21 - C2 -3G3C 3.2 ?
50 PsiBlast_CBE 78.8234% 24 - C2 -3G4T 3.8 ?
65 PsiBlast_CBE 78.6934% 21 - C2 -3G2D 3.8 ?
66 PsiBlast_CBE 78.6334% 23 - C2 -3G2D 3.4 ?
49 PsiBlast_CBE 77.8834% 26 - C2 -3G4T 3.6 ?
53 PsiBlast_CBE 77.5934% 23 - C2 -3G3C 3.4 ?