@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1665: (2018-01-17 )
MELHFNLELVETYKSNSQKARILTEDWVYRQSYCPNCGNNPLNHFENNRPVADFYCNHCSEEFELKSKKGNFSSTINDGAYATMMKRVQADNNPNFFFLTYTKNFEVNNFLVLPKQFVTPKSIIQRKPLAPTARRAGWIGCNIDLSQVPSKGRIFLVQDGQVRDPEKVTKEFKQGLFLRKSSLSSRGWTIEILNCIDKIEGSEFTLEDMYRFESDLKNIFVKNNHIKEKIRQQLQILRDKEIIEFKGRGKYRKL

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NACID_D_4(4ESJ)
T2D1_STRR6
[Raw transfer]
-
NACID_D_4(4ESJ)
T2D1_STRR6
[Raw transfer]
-
NACID_F_6(4ESJ)
T2D1_STRR6
[Raw transfer]
-
NACID_F_5(4KYW)
T2D1_STRPN
[Raw transfer]
-
NACID_F_6(4ESJ)
T2D1_STRR6
[Raw transfer]
-
NACID_F_5(4KYW)
T2D1_STRPN
[Raw transfer]
-
9 HHSearch 83.78100% -92 - C5 -4KYW 5.6 T2D1_STRPN
2 PsiBlast_PDB 83.5799% -92 * C5 *4KYW 5.6 T2D1_STRPN
8 HHSearch 81.20100% -96 - C5 -4ESJ 6.2 T2D1_STRR6
7 PsiBlast_CBE 81.0199% -96 - C5 -4ESJ 6.2 T2D1_STRR6
1 PsiBlast_PDB 80.6699% -95 - C5 -4ESJ 6.0 T2D1_STRR6
29 Fugue 72.5699% 32 - C5 -4ESJ 6.0 T2D1_STRR6
27 HHSearch 33.6014% -94 - C5 -1KQ8 - -
31 Fugue 30.2932%-246 - C6 -1LOI - ? -
21 HHSearch 29.9521%-105 - C5 -3VPB - LYSW_SULTO -
30 Fugue 29.2820% 34 * C6 *4OCV - ? -
12 HHSearch 28.1718% -87 - C5 -5K2M - ? -
26 HHSearch 28.1017%-106 - C5 -3QRF - -
13 HHSearch 25.5518% -96 - C5 -5K2M - ? -
37 Fugue 25.5423% -84 - C4 -8TFV - THAN_PODMA -
17 HHSearch 24.6321%-117 * C2 *2K4X - RS27A_THEAC -
15 HHSearch 24.6018%-115 - C2 -5JB3 - RS27A_PYRFU -
28 HHSearch 24.2429% -23 - C5 -2APO - NOP10_METJA -
6 PsiBlast_PDB 23.6925%-100 - C2 -4CW4 - FABY_PSEAE -
14 HHSearch 23.4318%-115 - C2 -5JBH - RS27A_PYRFU -
11 HHSearch 23.4121% -31 - C5 -3WWN - ? -