@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1683: (2018-01-17 )
MTKTILVTGGTSYIGSHTVKALLNAGYQVHILDNLSTGNRAAVDSRASFKELDVYDASALKAYLEENQIDAVLHYTGEIVVSESIENPSKYFTANVAGMNQVLKVLSEVGIQKIMFSSTASLYGNNCIDKPVTEDTLLDPVNPYAETKLMGERMIYWMANRYDWKYVIFRYFNVAGAEMDASNGLRVKNPTHIIPNINKTALGQNDSLKIFGDDYDTRDGSCIRDYIYVLDLA

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_A_2(4WOK)
?
[Raw transfer]




NAI_B_7(1EK6)
GALE_HUMAN
[Raw transfer]




NAD_A_2(4TWR)
?
[Raw transfer]




GUD_A_6(1Z45)
GAL10_YEAST
[Raw transfer]




EDO_A_10(1UDC)
GALE_ECOLI
[Raw transfer]




23 PsiBlast_CBE 86.3743%-114 - C1 -2C20 - ? -
22 PsiBlast_CBE 85.8343%-115 - C1 -2C20 - ? -
25 PsiBlast_CBE 85.6343%-120 - C1 -2C20 - ? -
79 HHSearch 84.1142%-114 - C1 -2C20 - ? -
1 PsiBlast_PDB 83.9543%-115 - C1 -2C20 - ? -
24 PsiBlast_CBE 83.9243%-113 - C1 -2C20 - ? -
21 PsiBlast_CBE 82.5543%-115 - C1 -2C20 - ? -
3 PsiBlast_PDB 80.4041% -97 - C1 -4WOK 9.5 ?
2 PsiBlast_PDB 80.1941% -98 - C1 -4TWR 10.8 ?
50 PsiBlast_CBE 74.1133% -60 - C1 -1GY8 - ? -
48 PsiBlast_CBE 73.0433% -61 - C1 -2CNB - ? -
49 PsiBlast_CBE 72.8033% -59 - C1 -2CNB - ? -
52 PsiBlast_CBE 71.6933% -58 - C1 -1GY8 - ? -
51 PsiBlast_CBE 71.2033% -38 - C1 -1GY8 - ? -
93 HHSearch 70.6832% -95 - C1 -4ZRM - ? -
53 PsiBlast_CBE 70.4533% -54 - C1 -1GY8 - ? -
92 HHSearch 70.2232% -93 - C1 -4ZRN - ? -
42 PsiBlast_CBE 69.8935% -25 - C1 -1A9Y - GALE_ECOLI -
6 PsiBlast_PDB 69.3336% -24 - C1 -1LRJ - GALE_ECOLI -
11 PsiBlast_PDB 68.6136% -22 - C1 -1XEL - GALE_ECOLI -
29 PsiBlast_CBE 65.5535% -22 - C1 -1UDC 2.4 GALE_ECOLI