@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1686: (2018-01-17 )
MKLENIDKSIQKQDILQGISLEVSPQKLTAFIGPNGAGKSTLLSIMSRLTKKDRGVLSIKGREIESWNSQELAQELTILKQKINYQAKLTVEELVSFGRFPYSRGRLRSEDWEKIRETLNYLELTNLKDRYINSLSGGQLQRVFIAMVLAQDTDFILLDEPLNNLDIKQSVSMMQILRRLVEELGKTIIIVLHDINMASQYADEIVAFKDGQVFSKGRTDQIMQADLLSQLYEIPITLADINDKKICIYS

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]



ANP_C_9(4R9U)
BTUD_ECOLI
[Raw transfer]



ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]



ACP_A_4(5X40)
CBIO_RHOCB
[Raw transfer]



ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]



ADP_B_3(3J15)
?
[Raw transfer]



ADP_A_2(4U00)
?
[Raw transfer]
74 HHSearch 74.1132%-145 * C1 *3RLF - MALK_ECOLI -
73 HHSearch 71.8232%-137 - C1 -2AWN - MALK_ECOLI -
31 PsiBlast_CBE 68.7933% -51 - C1 -3PUZ - MALK_ECOLI -
15 PsiBlast_PDB 68.3528% -62 - C1 -4FI3 - BTUD_ECOLI -
30 PsiBlast_CBE 66.8533% -51 - C1 -3RLF - MALK_ECOLI -
16 PsiBlast_PDB 66.7028% -62 - C1 -4R9U 4.5 BTUD_ECOLI
10 PsiBlast_PDB 66.5132% -52 - C1 -2IT1 - ? -
42 PsiBlast_CBE 66.1733% -51 - C1 -2AWO - MALK_ECOLI -
28 PsiBlast_CBE 65.7633% -52 - C1 -4KI0 - MALK_ECOLI -
39 PsiBlast_CBE 65.3433% -50 - C1 -3PUV - MALK_ECOLI -
12 PsiBlast_PDB 64.9428% -52 - C1 -4DBL - BTUD_ECOLI -
40 PsiBlast_CBE 64.9333% -56 - C1 -3PUV - MALK_ECOLI -
27 PsiBlast_CBE 64.6433% -51 - C1 -4KI0 - MALK_ECOLI -
36 PsiBlast_CBE 64.5833% -55 - C1 -3PUX - MALK_ECOLI -
32 PsiBlast_CBE 64.5333% -48 - C1 -3PUZ - MALK_ECOLI -
29 PsiBlast_CBE 64.4533% -50 - C1 -3RLF - MALK_ECOLI -
1 PsiBlast_PDB 64.2929% -68 - C1 -4G1U - HMUV_YERPE -
38 PsiBlast_CBE 64.2533% -55 - C1 -3PUW - MALK_ECOLI -
5 PsiBlast_PDB 64.1633% 44 - C1 -3TIF - Y796_METJA -
3 PsiBlast_PDB 64.1332% -23 - C1 -4U02 - ? -
17 PsiBlast_PDB 51.6330% -13 - C1 -5X40 5.4 CBIO_RHOCB
58 PsiBlast_CBE 34.4731% 29 - C1 -3J15 3.4 ?