@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1698: (2018-01-17 )
MTLDKGKVVYQIYPKSYKDTTENGIGDFRGIIEKIPYLAKLGVDMVWLNPFYPSPQRDNGYDISDYMAVDPLFGDMADFEEMVCVGKEHKIDFMLDMVLNHCSTEHEWFQKALAGDKYYQDFFFIQDQPTDWQSKFGGSAWAPFGDTGKYYLHLFDETQADLNWRNPNVRKELFKVVNFWRDKGVKGFRFDVINLIGKDEVSVDCPENEGKPAYTDKPIVHNYLRMMNQATFGSDDSFMTVGEMSSTTMENCVLYSSPDRQELSMTFNFHHLKVDYKDGQKWTLAPFDFEELKSLYHSWGKEMSDKDGWSALFWNNHDQPRALNRFVDIQNFRKEGATMLAASIHLSRGTPYIYMGEEIGMIDPDYDSMADYVDVESLNAYQMLLEEGKSQQEAFQIIQAKSRDNSRIPMQWDASENAGFSTGTPWLKAGKSYKYINVENEIQGPIFTFYQDLIRLRKEMPIISEGSYKPAFEDSKQVYAFERQFEDQKLLVLNNFYAKEVEIDLPAVYQNGQILISNYEDAEVSEKILLKPYQTLAIYVN

Atome Classification :

(61 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SUC_A_3(2PWE)
?
[Raw transfer]




SUC_B_4(2PWE)
?
[Raw transfer]




TEU_B_6(4H8V)
?
[Raw transfer]




ISL_A_4(4HA1)
?
[Raw transfer]




GLC_A_4(4H7V)
?
[Raw transfer]




GLC_B_6(4H7V)
?
[Raw transfer]




GLC_A_2(3A4A)
MALX3_YEAST
[Raw transfer]




GLC_A_2(3AXI)
MALX3_YEAST
[Raw transfer]




NOJ_B_6(2PWD)
?
[Raw transfer]




NOJ_A_5(2PWD)
?
[Raw transfer]




GLC_A_2(3A4A)
MALX3_YEAST
[Raw transfer]




CTS_B_6(2PWG)
?
[Raw transfer]




NOJ_A_11(3GBE)
?
[Raw transfer]




SUGAR_A_2(2ZID)
DEXB_STRMU
[Raw transfer]

-

GLC_A_4(4HOZ)
?
[Raw transfer]




CTS_A_5(2PWG)
?
[Raw transfer]




GOL_A_5(4GI8)
?
[Raw transfer]




GLC_B_6(4HA1)
?
[Raw transfer]




GOL_B_12(4GIA)
?
[Raw transfer]




TRS_B_6(4GO8)
?
[Raw transfer]




GOL_B_8(4GI9)
?
[Raw transfer]




GOL_B_15(4GI8)
?
[Raw transfer]




GLC_A_4(4HP5)
?
[Raw transfer]




GOL_A_5(4GIA)
?
[Raw transfer]




BGC_A_2(4WLC)
DEXB_STRMU
[Raw transfer]




GOL_B_10(4GI6)
?
[Raw transfer]




GOL_A_5(4AIE)
?
[Raw transfer]




TRS_A_4(4GO8)
?
[Raw transfer]




GOL_A_5(4GI9)
?
[Raw transfer]




GOL_A_5(4AIE)
?
[Raw transfer]




GLO_A_3(4M56)
O16G1_BACSU
[Raw transfer]




GOL_A_5(4GI6)
?
[Raw transfer]




TRS_B_6(1ZJB)
?
[Raw transfer]




GOL_A_3(4H2C)
?
[Raw transfer]




TRS_A_5(1ZJB)
?
[Raw transfer]




TRS_A_2(4M8U)
O16G1_BACSU
[Raw transfer]




GOL_A_3(4GIN)
?
[Raw transfer]




TRS_B_6(1ZJA)
?
[Raw transfer]




GOL_A_3(4HOW)
?
[Raw transfer]




TRS_A_2(4M8U)
O16G1_BACSU
[Raw transfer]




TRS_A_5(1ZJA)
?
[Raw transfer]




TRS_A_4(4GO9)
?
[Raw transfer]




TRS_A_2(4MAZ)
O16G1_BACSU
[Raw transfer]




TRS_A_2(4MB1)
O16G1_BACSU
[Raw transfer]




TRS_B_6(4GO9)
?
[Raw transfer]




TRS_A_5(1ZJA)
?
[Raw transfer]




TRS_A_5(2ZIC)
DEXB_STRMU
[Raw transfer]




GLO_B_7(4M56)
O16G1_BACSU
[Raw transfer]




TRS_A_2(4HOX)
?
[Raw transfer]




TRS_A_2(4MB1)
O16G1_BACSU
[Raw transfer]




GOL_A_7(4H2C)
?
[Raw transfer]




GLC_A_3(3AXH)
MALX3_YEAST
[Raw transfer]




EDO_A_4(3GBD)
?
[Raw transfer]




EDO_A_2(3GBD)
?
[Raw transfer]




102 HHSearch 79.9951% 24 - C1 -5BRQ - ? -
1 PsiBlast_PDB 79.4050% 25 - C1 -5BRQ - ? -
2 PsiBlast_PDB 77.7150% 26 - C1 -5BRP - ? -
25 PsiBlast_CBE 77.4650% 27 - C1 -5BRP - ? -
101 HHSearch 77.3251% 26 - C1 -5BRP - ? -
26 PsiBlast_CBE 76.8150% 26 - C1 -5BRP - ? -
112 HHSearch 75.7144% 40 - C1 -4AIE 2.6 ?
106 HHSearch 74.9242% 15 - C1 -5DO8 - ? -
3 PsiBlast_PDB 73.9541% 15 - C1 -5DO8 - ? -
113 HHSearch 73.1938% 15 - C1 -4M8U 3.1 O16G1_BACSU
4 PsiBlast_PDB 73.0843% 42 - C1 -4AIE 2.6 ?
110 HHSearch 72.7742% 27 - C1 -1UOK - O16G_BACCE -
28 PsiBlast_CBE 72.6141% 15 - C1 -5DO8 - ? -
27 PsiBlast_CBE 72.5441% 15 - C1 -5DO8 - ? -
7 PsiBlast_PDB 72.5340% 0 - C1 -4WLC 4.6 DEXB_STRMU
108 HHSearch 72.2840% -2 - C1 -4XB3 - DEXB_STRMU -
107 HHSearch 71.7638% 16 - C1 -4MB1 3.4 O16G1_BACSU
29 PsiBlast_CBE 71.5238% 24 - C1 -4M56 2.7 O16G1_BACSU
8 PsiBlast_PDB 71.4040% 0 - C1 -4XB3 - DEXB_STRMU -
11 PsiBlast_PDB 71.3538% 23 - C1 -4M56 2.5 O16G1_BACSU
10 PsiBlast_PDB 71.1037% 25 - C1 -4M8U 3.1 O16G1_BACSU
12 PsiBlast_PDB 70.9538% 21 - C1 -4MB1 3.4 O16G1_BACSU
109 HHSearch 70.8838% 31 - C1 -1ZJA 2.7 ?
6 PsiBlast_PDB 70.7540% 0 - C1 -2ZIC 3.5 DEXB_STRMU
55 PsiBlast_CBE 70.0438% 31 - C1 -4GI6 3.9 ?
13 PsiBlast_PDB 70.0438% 25 - C1 -4MAZ 4.4 O16G1_BACSU
52 PsiBlast_CBE 69.5238% 31 - C1 -4GI8 3.0 ?
49 PsiBlast_CBE 69.2238% 31 - C1 -4GIA 3.0 ?
48 PsiBlast_CBE 68.9038% 33 - C1 -4GIA 2.9 ?
66 PsiBlast_CBE 68.7238% 29 - C1 -4H7V 3.4 ?
32 PsiBlast_CBE 68.7138% 33 - C1 -2PWD 4.0 ?
62 PsiBlast_CBE 68.6838% 29 - C1 -4HA1 4.2 ?
20 PsiBlast_PDB 68.6638% 33 - C1 -1ZJB 4.2 ?
54 PsiBlast_CBE 68.6138% 32 - C1 -4GI6 2.8 ?
39 PsiBlast_CBE 68.6038% 33 - C1 -2PWG 4.5 ?
47 PsiBlast_CBE 68.3538% 27 - C1 -4H2C 3.9 ?
42 PsiBlast_CBE 68.2838% 26 - C1 -4GIN 2.9 ?
53 PsiBlast_CBE 68.2138% 32 - C1 -4GI8 4.2 ?
35 PsiBlast_CBE 68.2138% 33 - C1 -1ZJA 4.4 ?
50 PsiBlast_CBE 68.2038% 32 - C1 -4GI9 2.9 ?
41 PsiBlast_CBE 68.1438% 32 - C1 -4GO8 4.3 ?
34 PsiBlast_CBE 68.1038% 34 - C1 -1ZJB 4.3 ?
38 PsiBlast_CBE 67.9938% 32 - C1 -2PWG 3.2 ?
19 PsiBlast_PDB 67.9938% 34 - C1 -1ZJA 3.9 ?
46 PsiBlast_CBE 67.9038% 31 - C1 -4GO9 4.4 ?
40 PsiBlast_CBE 67.7338% 32 - C1 -4GO8 3.0 ?
51 PsiBlast_CBE 67.5138% 30 - C1 -4GI9 3.8 ?
67 PsiBlast_CBE 67.2438% 30 - C1 -4H7V 4.8 ?
63 PsiBlast_CBE 67.0538% 30 - C1 -4HA1 3.1 ?
69 PsiBlast_CBE 66.9034% 41 - C1 -3GBD 3.0 ?
45 PsiBlast_CBE 66.7638% 33 - C1 -4GO9 3.0 ?
33 PsiBlast_CBE 66.4838% 35 - C1 -2PWD 3.9 ?
14 PsiBlast_PDB 64.5136% 41 - C1 -4HOW 3.1 ?
18 PsiBlast_PDB 64.3336% 40 - C1 -4HOZ 4.0 ?
68 PsiBlast_CBE 64.2034% 41 * C1 *3GBE 3.4 ?
104 HHSearch 63.7735% 26 - C1 -3A4A 4.0 MALX3_YEAST
73 PsiBlast_CBE 63.3634% 31 - C1 -3AXI 3.7 MALX3_YEAST
17 PsiBlast_PDB 63.1636% 41 - C1 -4HP5 4.8 ?
15 PsiBlast_PDB 62.7236% 40 - C1 -4HOX 2.3 ?
71 PsiBlast_CBE 62.6434% 31 - C1 -3A4A 4.0 MALX3_YEAST
74 PsiBlast_CBE 62.3134% 32 - C1 -3AXH 2.6 MALX3_YEAST