@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1703: (2018-01-18 )
MKKWDLPIWLTRRKEMSEKLVEIKDLEISFGEGSKKFVAVKNANFFINKGETFSLVGESGSGKTTIGRAIIGLNDTSNGDIIFDGQKINGKKSREQAAELIRRIQMIFQDPAASLNERATVDYIISEGLYNHRLFKDEEERKEKVQSIIREVGLLAEHLTRYPHEFSGGQRQRIGIARALVMQPDFVIADEPISALDVSVRAQVLNLLKKFQKELGLTYLFIAHDLSVVRFISDRIAVIYKGVIVEVAETEELFNNPIHPYTQALLSAVPIPDPILERKKVLKVYDPSQHDYETDKPSMVEIRPGHYVWANQAELARYQKGLN

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_J_5(3C41)
?
[Raw transfer]



ATP_A_7(4YMU)
?
[Raw transfer]



ANP_K_6(3C41)
?
[Raw transfer]



ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]



AGS_B_6(3C4J)
?
[Raw transfer]



AGS_A_4(3C4J)
?
[Raw transfer]



12D_A_2(3B5J)

[Raw transfer]



POP_A_9(2D62)
?
[Raw transfer]



ADP_A_3(4YER)
?
[Raw transfer]



128_A_2(2PMK)

[Raw transfer]



AT4_B_6(2OLK)
?
[Raw transfer]



AT4_D_8(2OLK)
?
[Raw transfer]



LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]



ADP_C_7(3B5Z)
MSBA_SALTY
[Raw transfer]



LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]



IPA_A_6(3TIF)
Y796_METJA
[Raw transfer]
8 PsiBlast_PDB 85.9132%-150 - C1 -3TUZ - METN_ECOLI -
28 PsiBlast_CBE 83.2132%-150 - C1 -3TUI - METN_ECOLI -
7 PsiBlast_PDB 83.0032%-141 - C1 -3TUI - METN_ECOLI -
118 Fugue 82.1329%-140 - C1 -3TUZ - METN_ECOLI -
30 PsiBlast_CBE 81.3332%-141 - C1 -3TUI - METN_ECOLI -
29 PsiBlast_CBE 80.5332%-144 - C1 -3TUI - METN_ECOLI -
11 PsiBlast_PDB 78.6032%-148 - C1 -3TUJ - METN_ECOLI -
27 PsiBlast_CBE 77.5232%-145 - C1 -3TUZ - METN_ECOLI -
26 PsiBlast_CBE 77.2232%-146 - C1 -3TUZ - METN_ECOLI -
25 PsiBlast_CBE 76.8132%-147 - C1 -3TUZ - METN_ECOLI -
6 PsiBlast_PDB 75.9932%-149 - C1 -3DHW - METN_ECOLI -
121 Fugue 75.8930%-119 - C1 -1OXS - ? -
135 HHSearch 74.4432%-152 - C1 -3DHW - METN_ECOLI -
129 HHSearch 74.1034%-129 - C1 -1OXX - ? -
127 HHSearch 71.7629% 4 - C1 -4FWI - ? -
46 PsiBlast_CBE 71.1932%-135 - C1 -2YYZ - ? -
140 HHSearch 70.7831%-138 - C1 -3TUI - METN_ECOLI -
122 Fugue 69.2926%-105 - C1 -1Z47 - ? -
40 PsiBlast_CBE 68.4734% -71 - C1 -2OLK - ? -
33 PsiBlast_CBE 68.2033%-131 - C1 -3C41 6.1 ?
115 PsiBlast_CBE 33.0632% - - C1 -3B5Z 2.3 MSBA_SALTY