@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1704: (2018-01-18 )
MTKEKNVILTARDIVVEFDVRDKVLTAIRGVSLELVEGEVLALVGESGSGKSVLTKTFTGMLEENGRIAQGSIDYRGQDLTALSSHKDWEQIRGAKIATIFQDPMTSLDPIKTIGSQITEVIVKHQGKTAKEAKELAIDYMNKVGIPDADRRFNEYPFQYSGGMRQRIVIAIALACRPDVLICDEPTTALDVTIQAQIIDLLKSLQNEYHFTTIFITHDLGVVASIADKVAVMYAGEIVEYGTVEEVFYDPRHPYTWSLLSSLPQLADDKGDLYSIPGTPPSLYTDLKGDAFALRSDYAMQIDFEQKAPQFSVSETHWAKTWLLHEDAPKVEKPAVIANLHDKIREKMGFAHLAD

Atome Classification :

(45 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_B_3(4FWI)
?
[Raw transfer]




ATP_E_5(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_G_7(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_F_6(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ATP_E_5(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ATP_B_10(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_H_8(2FGK)

[Raw transfer]




ATP_C_11(1XEF)
HLYBP_ECOLX
[Raw transfer]




ANP_J_5(3C41)
?
[Raw transfer]




ATP_D_12(1XEF)

[Raw transfer]




ACP_A_4(4AYT)
ABCBA_HUMAN
[Raw transfer]




ATP_G_7(2FGJ)
HLYBP_ECOLX
[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ATP_F_6(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ATP_A_9(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_H_8(2FGJ)

[Raw transfer]




ADP_B_2(2FFB)

[Raw transfer]




128_A_2(2PMK)

[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




ADP_B_2(2FF7)

[Raw transfer]




ACP_A_4(4AYX)
ABCBA_HUMAN
[Raw transfer]




ADP_B_2(2FFA)

[Raw transfer]




ANP_A_2(4AYW)
ABCBA_HUMAN
[Raw transfer]




12D_A_2(3B5J)

[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




AT4_A_5(2OLK)
?
[Raw transfer]




ANP_A_6(3B5Y)
MSBA_SALTY
[Raw transfer]




ANP_D_7(3B5Y)
MSBA_SALTY
[Raw transfer]




ADP_C_7(3B5Z)
MSBA_SALTY
[Raw transfer]




ANP_C_8(3B5Y)
MSBA_SALTY
[Raw transfer]




ADP_A_5(3B5Z)
MSBA_SALTY
[Raw transfer]




100 HHSearch 86.3638% -79 - C1 -4FWI - ? -
1 PsiBlast_PDB 84.9339% -82 - C1 -4FWI 5.3 ?
91 Fugue 78.8226%-122 - C1 -3TUZ - METN_ECOLI -
102 HHSearch 77.5032%-147 - C1 -3TUI - METN_ECOLI -
22 PsiBlast_CBE 76.9336%-137 - C1 -4YMU 4.2 ?
11 PsiBlast_PDB 75.6833%-157 - C1 -3TUJ - METN_ECOLI -
4 PsiBlast_PDB 75.5636%-133 - C1 -4YMU - ? -
5 PsiBlast_PDB 75.4936%-137 - C1 -4YMV - ? -
34 PsiBlast_CBE 75.3732%-142 - C1 -3C4J 2.8 ?
3 PsiBlast_PDB 75.2136%-134 - C1 -4YMT - ? -
6 PsiBlast_PDB 75.1436%-134 - C1 -4YMW - ? -
101 HHSearch 75.0833%-154 - C1 -3DHW - METN_ECOLI -
15 PsiBlast_PDB 75.0632%-142 - C1 -2OLJ - ? -
2 PsiBlast_PDB 74.9136%-135 - C1 -4YMS - ? -
10 PsiBlast_PDB 74.6634%-149 - C1 -3TUZ - METN_ECOLI -
18 PsiBlast_PDB 74.5732%-137 - C1 -2Q0H 3.5 ?
16 PsiBlast_PDB 74.5132%-142 - C1 -2OLK 4.5 ?
40 PsiBlast_CBE 74.4432%-141 - C1 -2OLK - ? -
17 PsiBlast_PDB 74.2832%-142 - C1 -2OUK - ? -
21 PsiBlast_CBE 74.2736%-131 - C1 -4YMV - ? -
68 PsiBlast_CBE 49.6232% -31 - C1 -4AYW 3.6 ABCBA_HUMAN
70 PsiBlast_CBE 49.6032% -32 - C1 -4AYT 3.5 ABCBA_HUMAN
69 PsiBlast_CBE 48.7232% -26 - C1 -4AYX 3.2 ABCBA_HUMAN
45 PsiBlast_CBE 46.7334% -49 - C1 -2PMK 4.6
79 PsiBlast_CBE 45.5232% - - C1 -3B5Z 2.3 MSBA_SALTY
77 PsiBlast_CBE 45.5232% - - C1 -3B5Z 2.3 MSBA_SALTY
82 PsiBlast_CBE 45.1532% - - C1 -3B5Y 1.9 MSBA_SALTY
81 PsiBlast_CBE 45.1232% - - C1 -3B5Y 1.9 MSBA_SALTY
80 PsiBlast_CBE 45.1232% - - C1 -3B5Y 1.9 MSBA_SALTY
48 PsiBlast_CBE 44.9834% -51 - C1 -3B5J 4.3
63 PsiBlast_CBE 44.1432% -50 - C1 -2FFA 4.3
46 PsiBlast_CBE 44.0332% -51 - C1 -2FF7 4.3
61 PsiBlast_CBE 43.8132% -37 - C1 -2FGJ 4.8 HLYBP_ECOLX
59 PsiBlast_CBE 43.3832% -46 - C1 -2FGJ 4.3
64 PsiBlast_CBE 43.3032% -38 - C1 -1XEF 5.0
53 PsiBlast_CBE 43.2732% -52 - C1 -2FFB 4.0
50 PsiBlast_CBE 42.9632% -43 - C1 -2FGK 4.5 HLYBP_ECOLX
66 PsiBlast_CBE 42.7932% -40 - C1 -1XEF 5.1 HLYBP_ECOLX
65 PsiBlast_CBE 42.6232% -34 - C1 -1XEF 4.7 HLYBP_ECOLX
52 PsiBlast_CBE 42.6232% -43 - C1 -2FGK 5.0 HLYBP_ECOLX
62 PsiBlast_CBE 42.0432% -37 - C1 -2FGJ 4.8 HLYBP_ECOLX
49 PsiBlast_CBE 42.0332% -44 - C1 -2FGK 5.0
51 PsiBlast_CBE 41.9332% -44 - C1 -2FGK 4.8 HLYBP_ECOLX
67 PsiBlast_CBE 41.6932% -35 - C1 -1XEF 4.4 HLYBP_ECOLX
60 PsiBlast_CBE 41.1332% -35 - C1 -2FGJ 4.8 HLYBP_ECOLX