@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1725: (2018-01-18 )
MAKNVVITGATSGIGEAIARAYLEQGEDVVLTGRRIDRLEILKSEFAVSFPNQTVWTFPLDVTDMVMVKTVCSDILETIGRIDILVNNAGLALDLAPYQDYEELDMLTMLDTNVKGLMAVTHCFLPAMIKVNQGHIINMGSTAGIYAYAGAAVYSATKAAVKTFSDGLRIDTIATDIKVTTIQPGIVETDFSTVRFHGDKERAASVYQGIEALQAQDIADTVVYVTSQPRRVQITDMTIMANQQATGFMIHKK

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAP_B_6(3RKU)
YM71_YEAST
[Raw transfer]



NDP_D_11(2JAP)
?
[Raw transfer]



NAP_D_8(3RKU)
YM71_YEAST
[Raw transfer]



NDP_A_5(2JAP)
?
[Raw transfer]



NDP_A_5(2JAH)
?
[Raw transfer]



NAP_C_7(3P19)
?
[Raw transfer]



NAP_C_7(3RKU)
YM71_YEAST
[Raw transfer]



NAP_A_5(3RKU)
YM71_YEAST
[Raw transfer]



FMT_A_11(1W4Z)
ACT3_STRCO
[Raw transfer]



FMT_A_4(3QRW)
ACT3_STRCO
[Raw transfer]



ACY_A_9(1XG5)
DHR11_HUMAN
[Raw transfer]



ACY_C_10(1XG5)
DHR11_HUMAN
[Raw transfer]



EDO_A_10(3RRO)
FABG_VIBCH
[Raw transfer]



EDO_A_7(4I08)
FABG_VIBCH
[Raw transfer]



ISZ_G_7(1XR3)
ACT3_STRCO
[Raw transfer]
24 PsiBlast_CBE 84.2742% -87 - C1 -3ASV - ? -
22 PsiBlast_CBE 84.2642% -90 - C1 -3ASV - ? -
5 PsiBlast_PDB 83.9937% -97 - C1 -2JAP 13.9 ?
21 PsiBlast_CBE 83.7742% -88 - C1 -3ASV - ? -
31 PsiBlast_CBE 83.5737% -99 - C1 -2JAP 14.1 ?
4 PsiBlast_PDB 83.3340% -42 - C1 -3RKU 13.3 YM71_YEAST
25 PsiBlast_CBE 83.1342% -88 - C1 -3ASV - ? -
27 PsiBlast_CBE 83.1240% -43 - C1 -3RKU 13.4 YM71_YEAST
2 PsiBlast_PDB 82.7442% -90 - C1 -3ASV - ? -
33 PsiBlast_CBE 82.7037% -98 - C1 -2JAP - ? -
28 PsiBlast_CBE 82.5940% -42 - C1 -3RKU 13.5 YM71_YEAST
32 PsiBlast_CBE 82.4437% -98 - C1 -2JAP - ? -
26 PsiBlast_CBE 81.9940% -42 - C1 -3RKU 13.4 YM71_YEAST
23 PsiBlast_CBE 81.8442% -85 - C1 -3ASV - ? -
29 PsiBlast_CBE 81.2038%-130 - C1 -3TFO - ? -
129 HHSearch 80.7841%-115 * C1 *3ASU - ? -
8 PsiBlast_PDB 80.7335% -97 - C1 -2JAH 14.1 ?
6 PsiBlast_PDB 80.6535% -96 - C1 -3P19 - ? -
34 PsiBlast_CBE 80.1135% -96 - C1 -3P19 - ? -
1 PsiBlast_PDB 79.5742%-104 - C1 -3ASU - ? -
35 PsiBlast_CBE 77.3635%-104 - C1 -3P19 13.5 ?
17 PsiBlast_PDB 67.5930% -90 - C1 -3RRO 2.6 FABG_VIBCH