@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1757: (2018-01-19 )
MAKKPKKLEEISKKFGAEREKALNDALKLIEKDFGKGSIMRLGERAEQKVQVMSSGSLALDIALGSGGYPKGRIIEIYGPESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVAALVPRAEIDGDIGDSHVGLQARMMSQAMRKLGASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRGNTQIKGTGDQKETNVGKETKIKVVKNKVAPPFKEAVVEIMYGEGISKTGELLKIASDLDIIKKAGAWYSYKDEKIGQGSENAKKYLAEHPEIFDEIDKQVRSKFGLIDGEEVSEQDTENKKDEPKKEEAVNEEVPLDLGDELEIEIEE

Atome Classification :

(46 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DTP_B_2(1UBG)
RECA_MYCS2
[Raw transfer]




AGS_A_2(2ZRE)
RECA_MYCS2
[Raw transfer]




ADP_B_2(1MO3)
RECA_MYCTU
[Raw transfer]




DTP_A_3(2G88)
RECA_MYCS2
[Raw transfer]




AGS_A_2(2ZRJ)
RECA_MYCS2
[Raw transfer]




DTP_A_3(2G88)
RECA_MYCS2
[Raw transfer]




SAP_B_2(2ODW)
RECA_MYCS2
[Raw transfer]




DTP_A_2(2ZRG)
RECA_MYCS2
[Raw transfer]




DTP_A_2(2ZRM)
RECA_MYCS2
[Raw transfer]




DTP_B_2(2ODN)
RECA_MYCS2
[Raw transfer]




DTP_A_2(2ZRK)
RECA_MYCS2
[Raw transfer]




DTP_A_2(2ZRF)
RECA_MYCS2
[Raw transfer]




ADP_A_6(1XMV)
RECA_ECOLI
[Raw transfer]




SAP_B_2(1MO4)
RECA_MYCTU
[Raw transfer]




ADP_B_2(2OEP)
RECA_MYCS2
[Raw transfer]




SAP_B_2(1UBF)
RECA_MYCS2
[Raw transfer]




ADP_A_2(5JRJ)
?
[Raw transfer]




ADP_A_2(5JRJ)
?
[Raw transfer]




AGS_A_2(2ZRA)
RECA_MYCS2
[Raw transfer]




ANP_A_3(1XMS)
RECA_ECOLI
[Raw transfer]




DTP_B_2(1MO6)
RECA_MYCTU
[Raw transfer]




ADP_A_2(2ZRD)
RECA_MYCS2
[Raw transfer]




SAP_B_2(1MO5)
RECA_MYCTU
[Raw transfer]




ADP_A_2(2ZRO)
RECA_MYCS2
[Raw transfer]




ADP_A_3(1G18)
RECA_MYCTU
[Raw transfer]




DTP_A_2(2ZRP)
RECA_MYCS2
[Raw transfer]




ADP_B_2(1UBE)
RECA_MYCS2
[Raw transfer]




DTP_A_2(2ZRL)
RECA_MYCS2
[Raw transfer]




GOL_A_2(4PQY)
RECA_MYCTU
[Raw transfer]




GOL_A_5(4PR0)
RECA_MYCTU
[Raw transfer]




ADP_B_2(1REA)
RECA_ECOLI
[Raw transfer]




71 HHSearch 90.1463% -92 - C2 -3CMW - RECA_ECOLI -
73 HHSearch 89.4663% -89 - C2 -3CMT - RECA_ECOLI -
65 HHSearch 89.3662% -89 - C2 -3CMW - RECA_ECOLI -
38 PsiBlast_CBE 88.7763% -92 - C2 -3CMW - RECA_ECOLI -
66 HHSearch 88.6262% -85 - C2 -3CMT - RECA_ECOLI -
39 PsiBlast_CBE 88.5663% -89 - C2 -3CMT - RECA_ECOLI -
74 HHSearch 88.2464% -82 - C2 -3CMV - RECA_ECOLI -
40 PsiBlast_CBE 88.0263% -90 - C2 -3CMT - RECA_ECOLI -
35 PsiBlast_CBE 87.5063% -88 - C2 -3CMX - RECA_ECOLI -
37 PsiBlast_CBE 87.2763% -92 - C2 -3CMW - RECA_ECOLI -
36 PsiBlast_CBE 87.1563% -88 - C2 -3CMX - RECA_ECOLI -
13 PsiBlast_PDB 86.9862% -80 - C2 -2ZRM 6.4 RECA_MYCS2
14 PsiBlast_PDB 86.6562% -80 - C2 -2ZRO 7.1 RECA_MYCS2
64 HHSearch 86.5963% -85 - C2 -3CMU - RECA_ECOLI -
70 HHSearch 86.3163% -86 - C2 -3CMU - RECA_ECOLI -
34 PsiBlast_CBE 86.2663% -88 - C2 -3CMU - RECA_ECOLI -
19 PsiBlast_PDB 86.2261% -86 - C2 -2ZRA 6.0 RECA_MYCS2
26 PsiBlast_CBE 85.6461% -80 - C2 -2ZRK 7.2 RECA_MYCS2
20 PsiBlast_PDB 85.5061% -76 - C2 -2ZRC - RECA_MYCS2 -
15 PsiBlast_PDB 85.4562% -83 - C2 -2ZRP 6.0 RECA_MYCS2
24 PsiBlast_CBE 85.3561% -78 - C2 -2ZRD 6.4 RECA_MYCS2
27 PsiBlast_CBE 85.3361% -82 - C2 -2ZRJ 6.3 RECA_MYCS2
44 PsiBlast_CBE 85.2763% -94 - C2 -1XMV 8.2 RECA_ECOLI
59 HHSearch 85.1061% -81 - C2 -2G88 8.5 RECA_MYCS2
23 PsiBlast_CBE 84.9661% -82 - C2 -2ZRE 5.2 RECA_MYCS2
5 PsiBlast_PDB 84.8862% -87 - C2 -2G88 8.5 RECA_MYCS2
22 PsiBlast_CBE 84.7061% -86 - C2 -2ZRF 6.7 RECA_MYCS2
9 PsiBlast_PDB 84.5162% -75 - C2 -2OEP 6.0 RECA_MYCS2
45 PsiBlast_CBE 83.5563% -93 * C2 *1XMS 6.4 RECA_ECOLI
21 PsiBlast_CBE 83.3061% -85 - C2 -2ZRG 6.6 RECA_MYCS2
3 PsiBlast_PDB 82.7562% -76 - C2 -1UBF 6.7 RECA_MYCS2
4 PsiBlast_PDB 82.5762% -69 - C2 -1UBG 6.1 RECA_MYCS2
2 PsiBlast_PDB 82.3862% -75 - C2 -1UBE 5.8 RECA_MYCS2
7 PsiBlast_PDB 82.3362% -78 - C2 -2ODW 5.9 RECA_MYCS2
6 PsiBlast_PDB 82.0962% -76 - C2 -2ODN 7.2 RECA_MYCS2
43 PsiBlast_CBE 81.5263% - - C2 -1REA 2.7 RECA_ECOLI
17 PsiBlast_PDB 81.2362% -44 - C2 -4PR0 2.3 RECA_MYCTU
16 PsiBlast_PDB 81.1562% -46 - C2 -4PQY 2.3 RECA_MYCTU
25 PsiBlast_CBE 80.9561% -75 - C2 -2ZRL 5.7 RECA_MYCS2
31 PsiBlast_CBE 80.4761% -40 - C2 -1MO4 4.7 RECA_MYCTU
29 PsiBlast_CBE 79.7861% -48 - C2 -1MO6 6.2 RECA_MYCTU
32 PsiBlast_CBE 79.1861% -47 - C2 -1MO3 6.3 RECA_MYCTU
30 PsiBlast_CBE 78.2661% -43 - C2 -1MO5 5.7 RECA_MYCTU
33 PsiBlast_CBE 77.4361% -45 - C2 -1G18 6.4 RECA_MYCTU
61 HHSearch 71.7362% 38 - C2 -5JRJ 7.8 ?
46 PsiBlast_CBE 71.3663% 35 - C2 -5JRJ 7.8 ?