@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1781: (2018-01-19 )
MDKIVVQGGDNRLVGSVTIEGAKNAVLPLLAATILASEGKTVLQNVPILSDVFIMNQVVGGLNAKVDFDEEAHLVKVDATGDITEEAPYKYVSKMRASIVVLGPILARVGHAKVSMPGGCTIGSRPIDLHLKGLEAMGVKISQTAGYIEAKAERLHGAHIYMDFPSVGATQNLMMAATLADGVTVIENAAREPEIVDLAILLNEMGAKVKGAGTETITITGVEKLHGTTHNVVQDRIEAGTFMVAAAMTGGDVLIRDAVWEHNRPLIAKLLEMGVEVIEEDEGIRVRSQLENLKAVHVKTLPHPGFPTDMQAQFTALMTVAKGESTMVETVFENRFQHLEEMRRMGLHSEIIRDTARIVGGQPLQGAEVLSTDLRASAALILTGLVAQGETVVGKLVHLDRGYYGFHEKLAQLGAKIQRIEANDEDE

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

UD1_D_4(1UAE)
MURA_ECOLI
[Raw transfer]



EPU_A_3(2YVW)
MURA_AQUAE
[Raw transfer]



UD1_A_6(2RL2)
MURA_HAEIN
[Raw transfer]



UD1_A_3(2RL1)
MURA_HAEIN
[Raw transfer]



EPU_A_3(2YVW)
MURA_AQUAE
[Raw transfer]



0V5_B_17(5U4H)
?
[Raw transfer]



0V5_B_17(5U4H)
?
[Raw transfer]



0V5_A_11(5U4H)
?
[Raw transfer]



FCN_G_7(1UAE)
MURA_ECOLI
[Raw transfer]



GG6_A_5(2RL2)
MURA_HAEIN
[Raw transfer]



PEG_A_3(3ZH4)
MURA1_STRPI
[Raw transfer]



PEG_A_3(3ZH4)
MURA1_STRPI
[Raw transfer]
45 HHSearch 99.0764%-107 - C7 -3R38 - MURA1_LISMO -
2 PsiBlast_PDB 89.2760% -51 - C7 -3SG1 - MURA1_BACAN -
21 PsiBlast_CBE 89.0460% -53 - C7 -3SG1 - MURA1_BACAN -
1 PsiBlast_PDB 86.2463% -15 - C7 -3R38 - MURA1_LISMO -
15 PsiBlast_PDB 83.6644% -99 - C7 -2YVW 6.9 MURA_AQUAE
24 PsiBlast_CBE 83.0751% -44 - C7 -3VCY - MURA_VIBFM -
23 PsiBlast_CBE 82.9651% -44 - C7 -3VCY - MURA_VIBFM -
22 PsiBlast_CBE 81.8851% -43 - C7 -3VCY - MURA_VIBFM -
7 PsiBlast_PDB 81.7650% -52 - C7 -1NAW - MURA_ENTCC -
4 PsiBlast_PDB 81.7550% -46 - C7 -5BQ2 - MURA_PSEAE -
3 PsiBlast_PDB 81.7151% -43 - C7 -3VCY - MURA_VIBFM -
27 PsiBlast_CBE 81.5150% -44 - C7 -5BQ2 - MURA_PSEAE -
8 PsiBlast_PDB 81.4350% -52 - C7 -1UAE 7.7 MURA_ECOLI
26 PsiBlast_CBE 81.1750% -44 - C7 -5BQ2 - MURA_PSEAE -
25 PsiBlast_CBE 80.9650% -46 - C7 -5BQ2 - MURA_PSEAE -
5 PsiBlast_PDB 80.2850% -50 - C7 -3SPB - MURA_ENTCC -
63 HHSearch 79.3050% -53 * C7 *5U4H 3.3 ?
32 PsiBlast_CBE 79.2349% -55 - C7 -5U4H 3.3 ?
11 PsiBlast_PDB 79.0250% -57 - C7 -2RL2 5.3 MURA_HAEIN
9 PsiBlast_PDB 78.7049% -55 - C7 -5U4H 3.5 ?
10 PsiBlast_PDB 78.3350% -60 - C7 -2RL1 6.6 MURA_HAEIN
14 PsiBlast_PDB 71.8145% -37 - C7 -3ZH4 2.1 MURA1_STRPI
64 HHSearch 71.4843% -38 - C7 -2YVW 6.5 MURA_AQUAE
46 HHSearch 70.8245% -27 - C7 -3ZH4 2.1 MURA1_STRPI