@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1783: (2018-01-19 )
MSDKIGLFTGSFDPMTNGHLDIIERASRLFDKLYVGIFFNPHKQGFLPIENRKRGLEKALGHLENVEVVASHDELVVDVAKRLGATCLVRGLRNASDLQYEASFDYYNHQLSSDIETIYLHSRPEHLYISSSGVRELLKFGQDIACYVPESILEEIRNEKKD

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_5(1O6B)
COAD_BACSU
[Raw transfer]




COA_C_7(3PNB)
COAD_MYCTU
[Raw transfer]




CIT_E_11(5H7X)
COAD_ACIBS
[Raw transfer]




APC_C_8(3NBA)
COAD_MYCTU
[Raw transfer]




APC_A_5(3NBA)
COAD_MYCTU
[Raw transfer]




ADP_A_6(4NAT)
COAD_STAAW
[Raw transfer]




PNS_B_7(3NBK)
COAD_MYCTU
[Raw transfer]




PNS_A_5(3NBK)
COAD_MYCTU
[Raw transfer]




COA_A_2(3RHS)
COAD_MYCTU
[Raw transfer]




GOL_A_2(4E1A)
COAD_MYCTU
[Raw transfer]




ACY_A_6(3NV7)
COAD_HELPY
[Raw transfer]




DMS_C_18(3X1J)
?
[Raw transfer]




DMS_C_22(3X1K)
?
[Raw transfer]




114 HHSearch 88.5338%-166 - C1 -4F3R - COAD_COXBU -
121 HHSearch 88.3634%-132 - C1 -5JBN - COAD_ECOLI -
111 HHSearch 86.4934%-135 - C1 -1GN8 - COAD_ECOLI -
127 HHSearch 86.2132%-144 - C1 -3NBK - COAD_MYCTU -
131 Fugue 86.1634%-136 - C1 -1B6T - COAD_ECOLI -
110 HHSearch 85.8337%-128 - C1 -5H7X 2.6 COAD_ACIBS
14 PsiBlast_PDB 85.3636%-139 - C1 -1H1T - COAD_ECOLI -
55 PsiBlast_CBE 85.1436%-144 - C1 -1H1T - COAD_ECOLI -
58 PsiBlast_CBE 85.0136%-141 - C1 -1QJC - COAD_ECOLI -
31 PsiBlast_CBE 84.7838%-134 - C1 -5H7X - COAD_ACIBS -
56 PsiBlast_CBE 84.6036%-141 - C1 -1GN8 - COAD_ECOLI -
16 PsiBlast_PDB 84.5736%-142 - C1 -5JBN - COAD_ECOLI -
1 PsiBlast_PDB 84.3642%-137 - C1 -3ND5 - COAD_ENTFA -
32 PsiBlast_CBE 84.2038%-136 - C1 -5H7X - COAD_ACIBS -
12 PsiBlast_PDB 84.0836%-143 - C1 -1B6T - COAD_ECOLI -
35 PsiBlast_CBE 84.0238%-134 - C1 -5H7X - COAD_ACIBS -
33 PsiBlast_CBE 83.9838%-132 - C1 -5H7X - COAD_ACIBS -
54 PsiBlast_CBE 83.8440%-153 - C1 -1VLH - COAD_THEMA -
50 PsiBlast_CBE 83.8340%-155 - C1 -1VLH - COAD_THEMA -
118 HHSearch 83.7442%-128 - C1 -3ND6 - COAD_ENTFA -
125 HHSearch 75.9038%-131 - C1 -4NAT 4.2 COAD_STAAW